Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

RIPOR1

Unique Gene ID

Cirobu.g00001238

Gene Model ID

KH2012:KH.C1.949

Location

KhC1:3124600..3131114

Transcript Models and Sequences

  KH2012:KH.C1.949.v1.A.SL1-1

External Database Gene Card
Collections

Gateway full ORF

2 results

cima836667

Plate: VES63_L01

cima889947

Plate: VES70_N14

Gene collection 1 (N. Satoh)

1 result

ciad026j11

Plate: R1CiGC03k02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Chitin-bd_dom_sf SUPERFAMILY Chitin binding domain superfamily
Chitin-bd_dom ProSiteProfiles Chitin binding domain
Chitin-bd_dom Pfam Chitin binding domain
Chitin-bd_dom SMART Chitin binding domain

GOSlim

11 results

GO Term Annotation Origin Type
binding Blast molecular function
protein binding Blast molecular function
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
membrane Blast cellular component
extracellular exosome Blast cellular component
extracellular region InterProScan cellular component
vesicle Blast cellular component
organelle membrane Blast cellular component
cellular metabolic process InterProScan biological process
carbohydrate derivative binding InterProScan molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
binding Hs molecular function 38.1 0.009
protein binding Hs molecular function 38.1 0.009
cytoplasm Hs cellular component 38.1 0.009
Golgi apparatus Hs cellular component 38.1 0.009
vesicle membrane Hs cellular component 38.1 0.009
membrane Hs cellular component 38.1 0.009
extracellular exosome Hs cellular component 38.1 0.009
14-3-3 protein binding Hs molecular function 38.1 0.009

GO (InterProScan)

3 results

GO Term Analysis Type e-value
extracellular region Pfam cellular component 8.0E-14
chitin metabolic process SUPERFAMILY biological process 8.89E-16
chitin binding SUPERFAMILY molecular function 8.89E-16