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GENE CARD

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Gene Card

Best human hits

PCYT1A; PCYT1B; PCYT2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001331

Gene Model ID

KH2012:KH.C10.133

Location

KhC10:4012435..4018686

Transcript Models and Sequences

  KH2012:KH.C10.133.v1.A.ND1-1
KH2012:KH.C10.133.v1.A.nonSL2-1
KH2012:KH.C10.133.v1.A.SL3-1
KH2012:KH.C10.133.v1.A.SL4-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000006412
NCBI Reference Sequence XM_002130737.2
Collections

Gateway full ORF

2 results

cima833367

Plate: VES62_H12

cima871133

Plate: VES66_N18

Gene collection 1 (N. Satoh)

1 result

cicl002n12

Plate: R1CiGC08m22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Cyt_trans-like Pfam Cytidyltransferase-like domain
Rossmann-like_a/b/a_fold Gene3D Rossmann-like alpha/beta/alpha sandwich fold
Cyt_trans-like TIGRFAM Cytidyltransferase-like domain

GOSlim

24 results

GO Term Annotation Origin Type
catalytic activity Orthology molecular function
calmodulin binding Orthology molecular function
nuclear envelope Orthology cellular component
cytoplasm Orthology cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
spermatogenesis Orthology biological process
biosynthetic process Orthology biological process
membrane Orthology cellular component
transferase activity Orthology molecular function
protein homodimerization activity Orthology molecular function
reproductive process Orthology biological process
animal organ development Orthology biological process
transferase activity, transferring phosphorus-containing groups Orthology molecular function
cellular biosynthetic process Orthology biological process
phosphate-containing compound metabolic process Orthology biological process
organic substance metabolic process Orthology biological process
binding Orthology molecular function
envelope Orthology cellular component
cation binding Orthology molecular function
anion binding Orthology molecular function
cytoplasmic part Orthology cellular component

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
ovarian follicle development Hs biological process
catalytic activity Hs molecular function
choline-phosphate cytidylyltransferase activity Hs molecular function
calmodulin binding Hs molecular function
nuclear envelope Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
lipid metabolic process Hs biological process
phosphatidylcholine biosynthetic process Hs biological process
CDP-choline pathway Hs biological process
spermatogenesis Hs biological process
lipid binding Hs molecular function
phospholipid biosynthetic process Hs biological process
biosynthetic process Hs biological process
cell outer membrane Hs cellular component
membrane Hs cellular component
transferase activity Hs molecular function
nucleotidyltransferase activity Hs molecular function
phosphatidylcholine binding Hs molecular function
glycogen granule Hs cellular component
protein homodimerization activity Hs molecular function

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
catalytic activity Hs molecular function 367 3.00e-126
choline-phosphate cytidylyltransferase activity Hs molecular function 367 3.00e-126
ethanolamine-phosphate cytidylyltransferase activity Hs molecular function 105 3.05e-25
calmodulin binding Hs molecular function 350 2.78e-119
nuclear envelope Hs cellular component 350 2.78e-119
cytoplasm Hs cellular component 367 3.00e-126
endoplasmic reticulum Hs cellular component 367 3.00e-126
endoplasmic reticulum membrane Hs cellular component 367 3.00e-126
cytosol Hs cellular component 350 2.78e-119
plasma membrane Hs cellular component 350 2.78e-119
lipid binding Hs molecular function 350 2.78e-119
cell outer membrane Hs cellular component 350 2.78e-119
membrane Hs cellular component 350 2.78e-119
transferase activity Hs molecular function 367 3.00e-126
nucleotidyltransferase activity Hs molecular function 367 3.00e-126
phosphatidylcholine binding Hs molecular function 350 2.78e-119
glycogen granule Hs cellular component 350 2.78e-119
protein homodimerization activity Hs molecular function 350 2.78e-119

GO (InterProScan)

2 results

GO Term Analysis Type e-value
catalytic activity Pfam molecular function 3.3E-31
biosynthetic process Pfam biological process 3.3E-31

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