Gene Card
Best human hits
HMCN1; SPON1; THSD7A
Unique Gene ID
Cirobu.g00001344
Gene Model ID
KH2012:KH.C10.145
Location
KhC10:252838..258848
Transcript Models and Sequences
KH2012:KH.C10.145.v1.A.nonSL10-1
KH2012:KH.C10.145.v1.A.nonSL11-1
KH2012:KH.C10.145.v1.A.nonSL12-1
KH2012:KH.C10.145.v1.A.nonSL13-1
KH2012:KH.C10.145.v1.A.nonSL15-1
KH2012:KH.C10.145.v1.A.nonSL3-1
KH2012:KH.C10.145.v1.A.nonSL4-1
KH2012:KH.C10.145.v1.A.nonSL5-1
KH2012:KH.C10.145.v1.A.nonSL6-1
KH2012:KH.C10.145.v1.A.nonSL7-1
KH2012:KH.C10.145.v1.A.nonSL8-1
KH2012:KH.C10.145.v1.A.nonSL9-1
KH2012:KH.C10.145.v1.A.SL14-1
KH2012:KH.C10.145.v1.A.SL2-1
KH2012:KH.C10.145.v1.R.ND1-1
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000015081 |
| NCBI Reference Sequence | XM_002127570.3 |
Gateway full ORF
1 result
cima862889
Plate: VES65_F02
Gene collection 1 (N. Satoh)
3 results
n/a
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InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| TSP1_rpt | ProSiteProfiles | Thrombospondin type-1 (TSP1) repeat |
| EGF-like_CS | ProSitePatterns | EGF-like, conserved site |
| TSP1_rpt_sf | SUPERFAMILY | Thrombospondin type-1 (TSP1) repeat superfamily |
| TSP1_rpt_sf | Gene3D | Thrombospondin type-1 (TSP1) repeat superfamily |
| EGF-like_dom | ProSiteProfiles | EGF-like domain |
| TSP1_rpt | SMART | Thrombospondin type-1 (TSP1) repeat |
| TSP1_rpt | Pfam | Thrombospondin type-1 (TSP1) repeat |
GOSlim
16 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| calcium ion binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| extracellular region | Blast | cellular component |
| extracellular space | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| endoplasmic reticulum lumen | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| cell junction | Blast | cellular component |
| metal ion binding | Blast | molecular function |
| extracellular exosome | Blast | cellular component |
| extracellular region part | Blast | cellular component |
| cell periphery | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| plasma membrane region | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| calcium ion binding | Hs | molecular function | 92.8 | 1.23e-19 |
| protein binding | Hs | molecular function | 86.3 | 9.38e-18 |
| extracellular region | Hs | cellular component | 92.8 | 1.23e-19 |
| proteinaceous extracellular matrix | Hs | cellular component | 92.8 | 1.23e-19 |
| basement membrane | Hs | cellular component | 92.8 | 1.23e-19 |
| extracellular space | Hs | cellular component | 86.3 | 9.38e-18 |
| cytoplasm | Hs | cellular component | 92.8 | 1.23e-19 |
| endoplasmic reticulum lumen | Hs | cellular component | 86.3 | 9.38e-18 |
| plasma membrane | Hs | cellular component | 91.7 | 2.15e-19 |
| cell cortex | Hs | cellular component | 92.8 | 1.23e-19 |
| membrane | Hs | cellular component | 91.7 | 2.15e-19 |
| integral component of membrane | Hs | cellular component | 91.7 | 2.15e-19 |
| cell junction | Hs | cellular component | 92.8 | 1.23e-19 |
| extracellular matrix | Hs | cellular component | 92.8 | 1.23e-19 |
| cleavage furrow | Hs | cellular component | 92.8 | 1.23e-19 |
| metal ion binding | Hs | molecular function | 86.3 | 9.38e-18 |
| extracellular exosome | Hs | cellular component | 92.8 | 1.23e-19 |
| GO Term | Analysis | Type | e-value |
|---|
