Aniseed - Gene card

Gene Card

Best human hits

WIPF1; WIPF2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001365

Gene Model ID

KH2012:KH.C10.166

Location

KhC10:2660798..2670232

Transcript Models and Sequences

KH2012:KH.C10.166.v1.A.SL1-1
KH2012:KH.C10.166.v2.A.SL1-1
KH2012:KH.C10.166.v3.A.SL1-1
KH2012:KH.C10.166.v4.A.SL1-1
KH2012:KH.C10.166.v5.A.SL1-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000021309
NCBI Reference Sequence	XM_002129194.4
NCBI Reference Sequence	XM_018813841.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

4 results

cicl019k11

Plate: R1CiGC10l18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
WH2_dom	ProSiteProfiles	WH2 domain
WH2_dom	Pfam	WH2 domain

GOSlim

12 results

GO Term	Annotation Origin	Type
actin binding	Blast	molecular function
protein binding	Blast	molecular function
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
plasma membrane	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
cell projection	Blast	cellular component
plasma membrane region	Blast	cellular component
cell leading edge	Blast	cellular component
cytoskeletal part	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ruffle	Hs	cellular component	49.3	3.85e-06
actin binding	Hs	molecular function	50.1	1.60e-06
protein binding	Hs	molecular function	50.1	1.60e-06
profilin binding	Hs	molecular function	49.3	3.85e-06
nucleoplasm	Hs	cellular component	50.1	1.60e-06
cytoplasm	Hs	cellular component	50.1	1.60e-06
cytosol	Hs	cellular component	50.1	1.60e-06
cytoskeleton	Hs	cellular component	50.1	1.60e-06
actin filament	Hs	cellular component	49.3	3.85e-06
plasma membrane	Hs	cellular component	50.1	1.60e-06
actin cytoskeleton	Hs	cellular component	49.3	3.85e-06
SH3 domain binding	Hs	molecular function	49.3	3.85e-06
cytoplasmic vesicle	Hs	cellular component	49.3	3.85e-06
cell projection	Hs	cellular component	49.3	3.85e-06

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
actin binding	Pfam	molecular function	2.9E-9