Gene Card
Best human hits
FDPS; GGPS1
Unique Gene ID
Cirobu.g00001454
Gene Model ID
KH2012:KH.C10.248
Location
KhC10:1649623..1651911
Transcript Models and Sequences
KH2012:KH.C10.248.v1.A.SL1-1
KH2012:KH.C10.248.v1.A.SL3-1
KH2012:KH.C10.248.v1.R.ND2-1
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000008276 |
| NCBI Reference Sequence | XM_002128277.4 |
Gateway full ORF
2 results
cien183727
Plate: VES98_N15
cien186025
Plate: VES98_M23
Gene collection 1 (N. Satoh)
2 results
cicl047o24
Plate: R1CiGC13d09
cign031o05
Plate: R1CiGC42a14
n/a
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Click here to see the tree inference method
InterPro
4 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Isoprenoid_synthase_dom_sf | Gene3D | Isoprenoid synthase domain superfamily |
| Polyprenyl_synt_CS | ProSitePatterns | Polyprenyl synthetase, conserved site |
| Isoprenoid_synthase_dom_sf | SUPERFAMILY | Isoprenoid synthase domain superfamily |
| Polyprenyl_synt | Pfam | Polyprenyl synthetase |
GOSlim
30 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA binding | Blast | molecular function |
| protein binding | Orthology | molecular function |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Orthology | cellular component |
| mitochondrion | Blast | cellular component |
| cytosol | Orthology | cellular component |
| membrane | Orthology | cellular component |
| integral component of membrane | Blast | cellular component |
| transferase activity | Blast | molecular function |
| identical protein binding | Blast | molecular function |
| metal ion binding | Blast | molecular function |
| protein polyubiquitination | Orthology | biological process |
| actin binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| endosome | Orthology | cellular component |
| early endosome | Orthology | cellular component |
| Golgi apparatus | Orthology | cellular component |
| cytoskeleton | Orthology | cellular component |
| microtubule | Orthology | cellular component |
| plasma membrane | Orthology | cellular component |
| positive regulation of signal transduction | Orthology | biological process |
| microtubule cytoskeleton | Orthology | cellular component |
| cell junction | Orthology | cellular component |
| cytoplasmic vesicle | Orthology | cellular component |
| synapse | Orthology | cellular component |
| postsynaptic membrane | Orthology | cellular component |
| organelle | Orthology | cellular component |
| postsynapse | Orthology | cellular component |
| neuron part | Orthology | cellular component |
| cellular biosynthetic process | InterProScan | biological process |
GO (Orthology)
21 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| protein binding | Hs | molecular function |
| cytoplasm | Hs | cellular component |
| cytosol | Hs | cellular component |
| membrane | Hs | cellular component |
| protein polyubiquitination | Hs | biological process |
| actin binding | Hs | molecular function |
| SH3/SH2 adaptor activity | Hs | molecular function |
| nucleus | Hs | cellular component |
| endosome | Hs | cellular component |
| early endosome | Hs | cellular component |
| Golgi apparatus | Hs | cellular component |
| cytoskeleton | Hs | cellular component |
| microtubule | Hs | cellular component |
| plasma membrane | Hs | cellular component |
| positive regulation of signal transduction | Hs | biological process |
| postsynaptic density | Hs | cellular component |
| microtubule cytoskeleton | Hs | cellular component |
| cell junction | Hs | cellular component |
| cytoplasmic vesicle | Hs | cellular component |
| synapse | Hs | cellular component |
| postsynaptic membrane | Hs | cellular component |
GO (Blast)
14 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 348 | 2.07e-118 |
| dimethylallyltranstransferase activity | Hs | molecular function | 348 | 2.07e-118 |
| farnesyltranstransferase activity | Hs | molecular function | 43.5 | 9.46e-05 |
| geranyltranstransferase activity | Hs | molecular function | 348 | 2.07e-118 |
| protein binding | Hs | molecular function | 43.5 | 9.46e-05 |
| nucleoplasm | Hs | cellular component | 348 | 2.07e-118 |
| cytoplasm | Hs | cellular component | 348 | 2.07e-118 |
| mitochondrion | Hs | cellular component | 348 | 2.07e-118 |
| cytosol | Hs | cellular component | 348 | 2.07e-118 |
| membrane | Hs | cellular component | 348 | 2.07e-118 |
| integral component of membrane | Hs | cellular component | 348 | 2.07e-118 |
| transferase activity | Hs | molecular function | 348 | 2.07e-118 |
| identical protein binding | Hs | molecular function | 43.5 | 9.46e-05 |
| metal ion binding | Hs | molecular function | 348 | 2.07e-118 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| isoprenoid biosynthetic process | Pfam | biological process | 3.2E-85 |
