Gene Card
Best human hits
USP11; USP32; USP4
Unique Gene ID
Cirobu.g00001534
Gene Model ID
KH2012:KH.C10.320
Location
KhC10:2799919..2815805
Transcript Models and Sequences
External database links
3 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000004688 |
| ENSEMBL | ENSCING00000016015 |
| ENSEMBL | ENSCING00000016584 |
Gateway full ORF
2 results
cien176956
Plate: VES97_J14
cien217655
Plate: VES104_I01
Gene collection 1 (N. Satoh)
2 results
cieg007c22
Plate: R1CiGC16d09
cieg024d12
Plate: R1CiGC19i18
Regulatory Regions
10 results
- Cirobu.REG.KH2012.C10:2815582-2817555|Ubp4,Ubp8,Ubp11 REG00001325 [ regulatory_region (complex_region) ]
- Cirobu.REG.KH2012.C10:2815687-2816162|Ubp4,Ubp8,Ubp11 REG00001326 [ no_output ]
- Cirobu.REG.KH2012.C10:2816169-2817555|Ubp4,Ubp8,Ubp11 REG00001327 [ regulatory_region (complex_region) ]
- Cirobu.REG.KH2012.C10:2816957-2817555|Ubp4,Ubp8,Ubp11 REG00001328 [ no_output ]
- Cirobu.REG.KH2012.C10:2816165-2816946|Ubp4,Ubp8,Ubp11 REG00001329 [ regulatory_region (complex_region) ]
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
4 results
| IPR Term | Analysis | Definition |
|---|---|---|
| USP_dom | ProSiteProfiles | Ubiquitin specific protease domain |
| Peptidase_C19_UCH | Pfam | Peptidase C19, ubiquitin carboxyl-terminal hydrolase |
| USP4 | PANTHER | Ubiquitin carboxyl-terminal hydrolase USP4 |
| Znf_RING | ProSiteProfiles | Zinc finger, RING-type |
GOSlim
19 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| calcium ion binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| lysosome | Blast | cellular component |
| Golgi apparatus | Blast | cellular component |
| cytosol | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| proteolysis | Orthology | biological process |
| peptidase activity | Blast | molecular function |
| membrane | Blast | cellular component |
| hydrolase activity | Blast | molecular function |
| identical protein binding | Blast | molecular function |
| metal ion binding | Blast | molecular function |
| peptidase activity, acting on L-amino acid peptides | Orthology | molecular function |
| endopeptidase activity | Blast | molecular function |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| receptor binding | Blast | molecular function |
GO (Orthology)
3 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| ubiquitin-dependent protein catabolic process | Hs | biological process |
| protein deubiquitination | Hs | biological process |
| thiol-dependent ubiquitinyl hydrolase activity | Hs | molecular function |
GO (Blast)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| cysteine-type endopeptidase activity | Hs | molecular function | 113 | 1.63e-25 |
| thiol-dependent ubiquitin-specific protease activity | Hs | molecular function | 119 | 5.47e-27 |
| calcium ion binding | Hs | molecular function | 119 | 5.47e-27 |
| protein binding | Hs | molecular function | 119 | 5.47e-27 |
| nucleus | Hs | cellular component | 113 | 1.63e-25 |
| nucleoplasm | Hs | cellular component | 113 | 1.63e-25 |
| chromosome | Hs | cellular component | 113 | 1.63e-25 |
| cytoplasm | Hs | cellular component | 113 | 1.63e-25 |
| lysosome | Hs | cellular component | 111 | 6.66e-25 |
| Golgi apparatus | Hs | cellular component | 119 | 5.47e-27 |
| cytosol | Hs | cellular component | 119 | 5.47e-27 |
| plasma membrane | Hs | cellular component | 111 | 6.66e-25 |
| peptidase activity | Hs | molecular function | 119 | 5.47e-27 |
| cysteine-type peptidase activity | Hs | molecular function | 119 | 5.47e-27 |
| membrane | Hs | cellular component | 119 | 5.47e-27 |
| hydrolase activity | Hs | molecular function | 119 | 5.47e-27 |
| adenosine receptor binding | Hs | molecular function | 111 | 6.66e-25 |
| thiol-dependent ubiquitinyl hydrolase activity | Hs | molecular function | 119 | 5.47e-27 |
| identical protein binding | Hs | molecular function | 111 | 6.66e-25 |
| metal ion binding | Hs | molecular function | 119 | 5.47e-27 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein deubiquitination | PANTHER | biological process | 2.1E-76 |
| thiol-dependent ubiquitinyl hydrolase activity | Pfam | molecular function | 7.2E-26 |
