Aniseed - Gene card

Gene Card

Best human hits

COX6A1; COX6A2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001651

Gene Model ID

KH2012:KH.C10.43

Location

KhC10:4476353..4477579

Transcript Models and Sequences

External Database Gene Card

External database links

5 results

Database	Gene ID
ENSEMBL	ENSCING00000019252
NCBI Reference Sequence	XM_002121735.4
NCBI Reference Sequence	XM_009861709.2
NCBI Reference Sequence	XM_018813738.1
NCBI Reference Sequence	XM_018813739.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl051d09

Plate: R1CiGC13p16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Cyt_c_oxidase_su6a	PANTHER	Cytochrome c oxidase, subunit VIa
Cyt_c_oxidase_su6a_sf	SUPERFAMILY	Cytochrome c oxidase, subunit VIa superfamily
Cyt_c_oxidase_su6a	ProDom	Cytochrome c oxidase, subunit VIa
Cyt_c_oxidase_su6a	Pfam	Cytochrome c oxidase, subunit VIa
Cyt_c_oxidase_su6a_sf	Gene3D	Cytochrome c oxidase, subunit VIa superfamily

GOSlim

14 results

GO Term	Annotation Origin	Type
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
enzyme regulator activity	Orthology	molecular function
regulation of catalytic activity	Orthology	biological process
transmembrane transport	Orthology	biological process
catalytic activity	Orthology	molecular function
cellular metabolic process	Orthology	biological process
oxidation-reduction process	Orthology	biological process
monovalent inorganic cation transport	Orthology	biological process
membrane part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
phosphorylation	Orthology	biological process

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
cytochrome-c oxidase activity	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial respiratory chain complex IV	Hs	cellular component
generation of precursor metabolites and energy	Hs	biological process
mitochondrial electron transport, cytochrome c to oxygen	Hs	biological process
aerobic respiration	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
electron transport chain	Hs	biological process
enzyme regulator activity	Hs	molecular function
regulation of catalytic activity	Hs	biological process
hydrogen ion transmembrane transport	Hs	biological process

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
cytochrome-c oxidase activity	Hs	molecular function	60.1	4.57e-13
mitochondrion	Hs	cellular component	60.1	4.57e-13
mitochondrial inner membrane	Hs	cellular component	60.1	4.57e-13
mitochondrial respiratory chain complex IV	Hs	cellular component	60.1	4.57e-13
membrane	Hs	cellular component	60.1	4.57e-13
integral component of membrane	Hs	cellular component	60.1	4.57e-13
enzyme regulator activity	Hs	molecular function	60.1	4.57e-13

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
cytochrome-c oxidase activity	PANTHER	molecular function	4.7E-24
mitochondrial inner membrane	PANTHER	cellular component	4.7E-24
mitochondrial respiratory chain complex IV	PANTHER	cellular component	4.7E-24