Aniseed - Gene card

Gene Card

Best human hits

MGMT

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001719

Gene Model ID

KH2012:KH.C10.495

Location

KhC10:4712428..4713470

Transcript Models and Sequences

KH2012:KH.C10.495.v1.A.ND1-1
KH2012:KH.C10.495.v1.A.nonSL2-1
KH2012:KH.C10.495.v1.A.nonSL3-1
KH2012:KH.C10.495.v1.A.nonSL6-1
KH2012:KH.C10.495.v1.A.SL4-1
KH2012:KH.C10.495.v1.A.SL5-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000020477
NCBI Reference Sequence	XM_002125955.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl012h24

Plate: R1CiGC09f06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
MethylDNA_cys_MeTrfase_DNA-bd	Pfam	Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
MethylDNA_cys_MeTrfase_DNA-bd	TIGRFAM	Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
MethylDNA_cys_MeTrfase_DNA-bd	CDD	Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
MethylDNA_cys_MeTrfase_DNAb	SUPERFAMILY	Methylated DNA-protein cysteine methyltransferase, DNA binding domain
MethylDNA_cys_MeTrfase_AS	ProSitePatterns	Methylated-DNA-[protein]-cysteine S-methyltransferase, active site
WH-like_DNA-bd_sf	Gene3D	Winged helix-like DNA-binding domain superfamily

GOSlim

20 results

GO Term	Annotation Origin	Type
DNA binding	Orthology	molecular function
catalytic activity	Orthology	molecular function
calcium ion binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
DNA repair	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
membrane	Orthology	cellular component
transferase activity	Orthology	molecular function
negative regulation of apoptotic process	Orthology	biological process
metal ion binding	Orthology	molecular function
negative regulation of cell death	Orthology	biological process
metabolic process	Orthology	biological process
DNA metabolic process	Orthology	biological process
response to organic substance	Orthology	biological process
cellular response to stress	Orthology	biological process
response to oxidative stress	Orthology	biological process
endopeptidase activity	Orthology	molecular function
regulation of apoptotic process	Orthology	biological process
cellular response to organic substance	Orthology	biological process

GO (Orthology)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
DNA binding	Hs	molecular function
catalytic activity	Hs	molecular function
methylated-DNA-[protein]-cysteine S-methyltransferase activity	Hs	molecular function
calcium ion binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
DNA ligation	Hs	biological process
DNA repair	Hs	biological process
DNA methylation	Hs	biological process
DNA dealkylation involved in DNA repair	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
methyltransferase activity	Hs	molecular function
DNA-methyltransferase activity	Hs	molecular function
response to toxic substance	Hs	biological process
response to organic cyclic compound	Hs	biological process
membrane	Hs	cellular component
transferase activity	Hs	molecular function
methylation	Hs	biological process
cellular response to oxidative stress	Hs	biological process
response to drug	Hs	biological process
negative regulation of apoptotic process	Hs	biological process
regulation of cysteine-type endopeptidase activity involved in apoptotic process	Hs	biological process
response to ethanol	Hs	biological process
positive regulation of DNA repair	Hs	biological process
metal ion binding	Hs	molecular function
negative regulation of cell death	Hs	biological process
cellular response to organic cyclic compound	Hs	biological process
cellular response to ionizing radiation	Hs	biological process

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
DNA binding	Hs	molecular function	112	3.50e-31
catalytic activity	Hs	molecular function	112	3.50e-31
methylated-DNA-[protein]-cysteine S-methyltransferase activity	Hs	molecular function	112	3.50e-31
calcium ion binding	Hs	molecular function	112	3.50e-31
nucleus	Hs	cellular component	112	3.50e-31
nucleoplasm	Hs	cellular component	112	3.50e-31
methyltransferase activity	Hs	molecular function	112	3.50e-31
DNA-methyltransferase activity	Hs	molecular function	112	3.50e-31
membrane	Hs	cellular component	112	3.50e-31
transferase activity	Hs	molecular function	112	3.50e-31
metal ion binding	Hs	molecular function	112	3.50e-31

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
catalytic activity	CDD	molecular function	3.75034E-33
methylated-DNA-[protein]-cysteine S-methyltransferase activity	ProSitePatterns	molecular function
DNA repair	CDD	biological process	3.75034E-33