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GENE CARD

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Gene Card

Best human hits

UBE2D4; UBE2L3; UBE2L6

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001733

Gene Model ID

KH2012:KH.C10.507

Location

KhC10:2955732..2958547

Transcript Models and Sequences

  KH2012:KH.C10.507.v1.A.nonSL3-1
KH2012:KH.C10.507.v1.A.nonSL5-1
KH2012:KH.C10.507.v1.A.nonSL6-1
KH2012:KH.C10.507.v1.A.nonSL7-1
KH2012:KH.C10.507.v1.A.SL10-1
KH2012:KH.C10.507.v1.A.SL1-1
KH2012:KH.C10.507.v1.A.SL11-1
KH2012:KH.C10.507.v1.A.SL2-1
KH2012:KH.C10.507.v1.A.SL4-1
KH2012:KH.C10.507.v1.A.SL8-1
KH2012:KH.C10.507.v1.A.SL9-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000013961
NCBI Reference Sequence XM_002130997.4
Collections

Gateway full ORF

2 results

cima87970

Plate: VES57_G11

cima897495

Plate: VES72_F05

Gene collection 1 (N. Satoh)

1 result

cits044j19

Plate: R1CiGC35d05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
UBQ-conjugat_E2 Pfam Ubiquitin-conjugating enzyme E2
UBQ-conjugating_enzyme/RWD Gene3D Ubiquitin-conjugating enzyme/RWD-like
UBQ-conjugating_AS ProSitePatterns Ubiquitin-conjugating enzyme, active site
UBQ-conjugating_enzyme/RWD SUPERFAMILY Ubiquitin-conjugating enzyme/RWD-like
UBQ-conjugat_E2 ProSiteProfiles Ubiquitin-conjugating enzyme E2
UBQ-conjugat_E2 CDD Ubiquitin-conjugating enzyme E2

GOSlim

18 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
transcription coactivator activity Blast molecular function
RNA binding Blast molecular function
ubiquitin-protein transferase activity Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
transferase activity Blast molecular function
ubiquitin-like protein transferase activity Blast molecular function
enzyme binding Blast molecular function
ubiquitin protein ligase binding Blast molecular function
extracellular exosome Blast cellular component
intracellular part Blast cellular component
macromolecular complex Blast cellular component
enzyme regulator activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ubiquitin ligase complex Hs cellular component 206 1.90e-68
nucleotide binding Hs molecular function 206 1.90e-68
transcription coactivator activity Hs molecular function 206 1.90e-68
RNA binding Hs molecular function 206 1.90e-68
ubiquitin-protein transferase activity Hs molecular function 206 1.90e-68
protein binding Hs molecular function 206 1.90e-68
ATP binding Hs molecular function 206 1.90e-68
nucleus Hs cellular component 206 1.90e-68
nucleoplasm Hs cellular component 206 1.90e-68
cytoplasm Hs cellular component 206 1.90e-68
cytosol Hs cellular component 206 1.90e-68
transferase activity Hs molecular function 206 1.90e-68
ubiquitin-like protein transferase activity Hs molecular function 156 7.98e-50
enzyme binding Hs molecular function 206 1.90e-68
ubiquitin protein ligase binding Hs molecular function 206 1.90e-68
ISG15 transferase activity Hs molecular function 156 7.98e-50
ubiquitin binding Hs molecular function 156 7.98e-50
ubiquitin conjugating enzyme activity Hs molecular function 206 1.90e-68
extracellular exosome Hs cellular component 206 1.90e-68
ubiquitin-protein transferase activator activity Hs molecular function 206 1.90e-68

GO (InterProScan)

No result

GO Term Analysis Type e-value

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