Aniseed - Gene card

Gene Card

Best human hits

GEMIN7

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001802

Gene Model ID

KH2012:KH.C10.570

Location

KhC10:59535..60839

Transcript Models and Sequences

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000018224
NCBI Reference Sequence	XM_002121314.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

ciad038d16

Plate: R1CiGC04a12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
SMN_gemin7	PANTHER	SMN complex, gem-associated protein 7
SMN_gemin7	CDD	SMN complex, gem-associated protein 7
SMN_gemin7	Pfam	SMN complex, gem-associated protein 7
SMN_gemin7	ProDom	SMN complex, gem-associated protein 7

GOSlim

13 results

GO Term	Annotation Origin	Type
mRNA splicing, via spliceosome	Orthology	biological process
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
mRNA processing	Orthology	biological process
RNA splicing	Orthology	biological process
nuclear body	Orthology	cellular component
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
intracellular transport	Orthology	biological process

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
spliceosomal snRNP assembly	Hs	biological process
mRNA splicing, via spliceosome	Hs	biological process
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
mRNA processing	Hs	biological process
RNA splicing	Hs	biological process
nuclear body	Hs	cellular component
SMN complex	Hs	cellular component
SMN-Sm protein complex	Hs	cellular component
nuclear import	Hs	biological process
Gemini of coiled bodies	Hs	cellular component

GO (Blast)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	72.8	4.02e-18
nucleus	Hs	cellular component	72.8	4.02e-18
nucleoplasm	Hs	cellular component	72.8	4.02e-18
cytoplasm	Hs	cellular component	72.8	4.02e-18
cytosol	Hs	cellular component	72.8	4.02e-18
nuclear body	Hs	cellular component	72.8	4.02e-18
SMN complex	Hs	cellular component	72.8	4.02e-18
SMN-Sm protein complex	Hs	cellular component	72.8	4.02e-18
Gemini of coiled bodies	Hs	cellular component	72.8	4.02e-18

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
SMN-Sm protein complex	CDD	cellular component	3.70068E-39

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cien146906

cien179329

Gene collection 1 (N. Satoh)

cicl056h13

ciad038d16

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)