Aniseed - Gene card

Gene Card

Best human hits

KDELR1; KDELR2; KDELR3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001880

Gene Model ID

KH2012:KH.C10.78

Location

KhC10:1809690..1813597

Transcript Models and Sequences

KH2012:KH.C10.78.v1.A.ND1-1
KH2012:KH.C10.78.v2.A.SL2-1
KH2012:KH.C10.78.v2.A.SL3-1
KH2012:KH.C10.78.v2.A.SL4-1
KH2012:KH.C10.78.v2.A.SL5-1
KH2012:KH.C10.78.v3.A.SL2-1
KH2012:KH.C10.78.v3.A.SL3-1
KH2012:KH.C10.78.v3.A.SL4-1
KH2012:KH.C10.78.v3.A.SL5-1
KH2012:KH.C10.78.v4.A.SL3-1
KH2012:KH.C10.78.v5.A.ND6-1
KH2012:KH.C10.78.v6.A.SL7-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000008256
NCBI Reference Sequence	NM_001032499.1
NCBI Reference Sequence	XM_018813569.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg017o01

Plate: R1CiGC18c04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
ER_ret_rcpt	ProSitePatterns	ER lumen protein retaining receptor
ER_ret_rcpt	Pfam	ER lumen protein retaining receptor
ER_ret_rcpt	PANTHER	ER lumen protein retaining receptor
ER_ret_rcpt	PRINTS	ER lumen protein retaining receptor

GOSlim

20 results

GO Term	Annotation Origin	Type
Golgi membrane	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
intracellular protein transport	Orthology	biological process
protein transport	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
cytoplasmic vesicle	Orthology	cellular component
extracellular exosome	Orthology	cellular component
binding	Orthology	molecular function
Golgi apparatus part	Orthology	cellular component
cellular process	Orthology	biological process
protein localization to endoplasmic reticulum	Orthology	biological process
endomembrane system	Orthology	cellular component
cytoplasmic part	Blast	cellular component
intracellular membrane-bounded organelle	Blast	cellular component
whole membrane	Blast	cellular component
intracellular organelle part	Blast	cellular component
bounding membrane of organelle	Blast	cellular component

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
Golgi membrane	Hs	cellular component
KDEL sequence binding	Hs	molecular function
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
Golgi apparatus	Hs	cellular component
cis-Golgi network	Hs	cellular component
protein retention in ER lumen	Hs	biological process
intracellular protein transport	Hs	biological process
retrograde vesicle-mediated transport, Golgi to ER	Hs	biological process
protein transport	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
vesicle-mediated transport	Hs	biological process
transport vesicle	Hs	cellular component
ER retention sequence binding	Hs	molecular function
extracellular exosome	Hs	cellular component

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	397	5.84e-143
KDEL sequence binding	Hs	molecular function	397	5.84e-143
endoplasmic reticulum	Hs	cellular component	397	5.84e-143
endoplasmic reticulum membrane	Hs	cellular component	397	5.84e-143
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component	167	1.87e-52
Golgi apparatus	Hs	cellular component	397	5.84e-143
cis-Golgi network	Hs	cellular component	397	5.84e-143
membrane	Hs	cellular component	397	5.84e-143
integral component of membrane	Hs	cellular component	397	5.84e-143
transport vesicle	Hs	cellular component	397	5.84e-143
COPI-coated vesicle membrane	Hs	cellular component	167	1.87e-52
cytoplasmic vesicle	Hs	cellular component	167	1.87e-52
endoplasmic reticulum-Golgi intermediate compartment membrane	Hs	cellular component	167	1.87e-52
ER retention sequence binding	Hs	molecular function	397	5.84e-143
extracellular exosome	Hs	cellular component	397	5.84e-143

GO (InterProScan)