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GENE CARD

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Gene Card

Best human hits

DLG2; SYNJ2BP; SYNJ2BP-COX16

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002018

Gene Model ID

KH2012:KH.C11.203

Location

KhC11:2114240..2117567

Transcript Models and Sequences

  KH2012:KH.C11.203.v1.A.nonSL4-1
KH2012:KH.C11.203.v1.A.SL1-1
KH2012:KH.C11.203.v1.A.SL2-1
KH2012:KH.C11.203.v2.A.ND3-1
KH2012:KH.C11.203.v3.A.SL5-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000000168
NCBI Reference Sequence XM_002126890.3
NCBI Reference Sequence XM_004226597.3
Collections

Gateway full ORF

2 results

cien145977

Plate: VES93_B02

cien154783

Plate: VES94_L07

Gene collection 1 (N. Satoh)

1 result

citb11n2

Plate: R1CiGC30e14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
PDZ Pfam PDZ domain
PDZ SMART PDZ domain
PDZ ProSiteProfiles PDZ domain
PDZ_sf SUPERFAMILY PDZ superfamily

GOSlim

24 results

GO Term Annotation Origin Type
protein binding Blast molecular function
mitochondrion Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
protein C-terminus binding Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
kinase binding Blast molecular function
cell junction Blast cellular component
axon Blast cellular component
mitochondrial membrane Blast cellular component
cell projection Blast cellular component
synapse Blast cellular component
postsynaptic membrane Blast cellular component
kinase activity Blast molecular function
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component
integral component of plasma membrane Blast cellular component
macromolecular complex Blast cellular component
organelle Blast cellular component
postsynapse Blast cellular component
neuron part Blast cellular component
receptor binding Blast molecular function
cell projection part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
guanylate kinase activity Hs molecular function 81.3 8.30e-19
protein binding Hs molecular function 102 7.12e-29
mitochondrion Hs cellular component 102 7.12e-29
mitochondrial outer membrane Hs cellular component 102 7.12e-29
cytosol Hs cellular component 81.3 8.30e-19
plasma membrane Hs cellular component 81.3 8.30e-19
protein C-terminus binding Hs molecular function 102 7.12e-29
voltage-gated potassium channel complex Hs cellular component 81.3 8.30e-19
ionotropic glutamate receptor complex Hs cellular component 81.3 8.30e-19
postsynaptic density Hs cellular component 81.3 8.30e-19
membrane Hs cellular component 102 7.12e-29
integral component of membrane Hs cellular component 102 7.12e-29
kinase binding Hs molecular function 81.3 8.30e-19
cell junction Hs cellular component 81.3 8.30e-19
axon Hs cellular component 81.3 8.30e-19
integral component of mitochondrial outer membrane Hs cellular component 102 7.12e-29
mitochondrial membrane Hs cellular component 101 6.80e-28
ionotropic glutamate receptor binding Hs molecular function 81.3 8.30e-19
cell projection Hs cellular component 81.3 8.30e-19
juxtaparanode region of axon Hs cellular component 81.3 8.30e-19
synapse Hs cellular component 81.3 8.30e-19
postsynaptic membrane Hs cellular component 81.3 8.30e-19

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 6.44E-26

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