Login
Help

GENE CARD

Submit your Data

  1. Gene 'Harore.CG.MTP2014.S1...'

Gene Card

Best human hits

CSMD1; SELP; SVEP1

Unique Gene ID

Cirobu.g00002094

Gene Model ID

KH2012:KH.C11.274

Location

KhC11:384102..394186

External Database Gene Card

External database links

2 results

Collections

Gene collection 1 (N. Satoh)

2 results

cilv003i02

Plate: R1CiGC25i13

cilv011p03

Plate: R1CiGC25p12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
VWF_A Pfam von Willebrand factor, type A
Sushi_SCR_CCP_dom CDD Sushi/SCR/CCP domain
Sushi_SCR_CCP_dom Pfam Sushi/SCR/CCP domain
Sushi_SCR_CCP_dom ProSiteProfiles Sushi/SCR/CCP domain
VWF_A ProSiteProfiles von Willebrand factor, type A
Sushi/SCR/CCP_sf SUPERFAMILY Sushi/SCR/CCP superfamily
VWF_A SMART von Willebrand factor, type A
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
Sushi_SCR_CCP_dom SMART Sushi/SCR/CCP domain

GOSlim

22 results

GO Term Annotation Origin Type
chromatin binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cytoplasm Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
metal ion binding Blast molecular function
carbohydrate derivative binding Blast molecular function
anion binding Blast molecular function
plasma membrane part Blast cellular component
cell surface Blast cellular component
binding Blast molecular function
whole membrane Blast cellular component
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
bounding membrane of organelle Blast cellular component
small molecule binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
lipopolysaccharide binding Hs molecular function 178 1.68e-46
chromatin binding Hs molecular function 137 9.78e-33
calcium ion binding Hs molecular function 178 1.68e-46
protein binding Hs molecular function 178 1.68e-46
extracellular region Hs cellular component 137 9.78e-33
extracellular space Hs cellular component 178 1.68e-46
cytoplasm Hs cellular component 137 9.78e-33
plasma membrane Hs cellular component 178 1.68e-46
integral component of plasma membrane Hs cellular component 178 1.68e-46
heparin binding Hs molecular function 178 1.68e-46
external side of plasma membrane Hs cellular component 178 1.68e-46
membrane Hs cellular component 178 1.68e-46
integral component of membrane Hs cellular component 178 1.68e-46
carbohydrate binding Hs molecular function 178 1.68e-46
platelet dense granule membrane Hs cellular component 178 1.68e-46
platelet alpha granule membrane Hs cellular component 178 1.68e-46
sialic acid binding Hs molecular function 178 1.68e-46
fucose binding Hs molecular function 178 1.68e-46
glycosphingolipid binding Hs molecular function 178 1.68e-46
metal ion binding Hs molecular function 178 1.68e-46
calcium-dependent protein binding Hs molecular function 178 1.68e-46
oligosaccharide binding Hs molecular function 178 1.68e-46

GO (InterProScan)

No result

GO Term Analysis Type e-value