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GENE CARD

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Gene Card

Best human hits

LAMB1; LAMB2; LAMB4

Unique Gene ID

Cirobu.g00002100

Gene Model ID

KH2012:KH.C11.28

Location

KhC11:1163180..1172924

Transcript Models and Sequences

  KH2012:KH.C11.28.v1.A.ND1-1

External Database Gene Card
Collections

Gateway full ORF

1 result

cima896658

Plate: VES71_C24

Gene collection 1 (N. Satoh)

2 results

cilv005k05

Plate: R1CiGC25i02

ciad042g03

Plate: R1CiGC04j21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
EGF-like_dom SMART EGF-like domain
Laminin_EGF SMART Laminin EGF domain
VWF_A Pfam von Willebrand factor, type A
Laminin_EGF ProSiteProfiles Laminin EGF domain
EGF-like_CS ProSitePatterns EGF-like, conserved site
Laminin_EGF ProSitePatterns Laminin EGF domain
Laminin_EGF Pfam Laminin EGF domain
VWF_A ProSiteProfiles von Willebrand factor, type A
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
VWF_A SMART von Willebrand factor, type A

GOSlim

12 results

GO Term Annotation Origin Type
integrin binding Blast molecular function
structural molecule activity Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
endoplasmic reticulum lumen Blast cellular component
synapse Blast cellular component
perinuclear region of cytoplasm Blast cellular component
extracellular exosome Blast cellular component
extracellular region part Blast cellular component
macromolecular complex Blast cellular component
synapse part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
integrin binding Hs molecular function 234 2.79e-65
structural molecule activity Hs molecular function 234 2.79e-65
extracellular matrix structural constituent Hs molecular function 214 1.35e-58
protein binding Hs molecular function 214 1.35e-58
extracellular region Hs cellular component 234 2.79e-65
proteinaceous extracellular matrix Hs cellular component 234 2.79e-65
basement membrane Hs cellular component 234 2.79e-65
basal lamina Hs cellular component 234 2.79e-65
laminin-1 complex Hs cellular component 214 1.35e-58
laminin-2 complex Hs cellular component 214 1.35e-58
laminin-3 complex Hs cellular component 234 2.79e-65
extracellular space Hs cellular component 234 2.79e-65
endoplasmic reticulum lumen Hs cellular component 234 2.79e-65
extracellular matrix Hs cellular component 234 2.79e-65
synaptic cleft Hs cellular component 234 2.79e-65
laminin complex Hs cellular component 234 2.79e-65
laminin-8 complex Hs cellular component 214 1.35e-58
laminin-10 complex Hs cellular component 214 1.35e-58
laminin-11 complex Hs cellular component 234 2.79e-65
synapse Hs cellular component 234 2.79e-65
perinuclear region of cytoplasm Hs cellular component 214 1.35e-58
extracellular exosome Hs cellular component 234 2.79e-65

GO (InterProScan)

No result

GO Term Analysis Type e-value