Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
NCBI Reference Sequence	XM_002119323.3
NCBI Reference Sequence	XM_018814002.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb043g09

Plate: R1CiGC33c12

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Znf_RING_CS	ProSitePatterns	Zinc finger, RING-type, conserved site
E3_ubiquit_lig_Bre1	PANTHER	E3 ubiquitin ligase Bre1
Znf_RING	ProSiteProfiles	Zinc finger, RING-type
Znf_RING	SMART	Zinc finger, RING-type
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type
Znf_C3HC4_RING-type	Pfam	Zinc finger, C3HC4 RING-type

GOSlim

27 results

GO Term	Annotation Origin	Type
chromatin binding	Blast	molecular function
transcription coactivator activity	Blast	molecular function
catalytic activity	Blast	molecular function
ubiquitin-protein transferase activity	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Blast	cellular component
cytosol	Blast	cellular component
membrane	Blast	cellular component
protein ubiquitination	InterProScan	biological process
transferase activity	Blast	molecular function
ubiquitin protein ligase binding	Blast	molecular function
protein homodimerization activity	Blast	molecular function
neuron projection	Blast	cellular component
metal ion binding	Blast	molecular function
intracellular part	Blast	cellular component
macromolecular complex	Blast	cellular component
RNA binding	Blast	molecular function
membrane part	Blast	cellular component
enzyme binding	Blast	molecular function
intracellular organelle part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
cell projection part	Blast	cellular component
axon	Blast	cellular component
synapse part	Blast	cellular component
organelle organization	InterProScan	biological process

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin ligase complex	Hs	cellular component	671	0.0
p53 binding	Hs	molecular function	359	8.26e-109
chromatin binding	Hs	molecular function	359	8.26e-109
transcription coactivator activity	Hs	molecular function	359	8.26e-109
mRNA 3'-UTR binding	Hs	molecular function	671	0.0
catalytic activity	Hs	molecular function	359	8.26e-109
ubiquitin-protein transferase activity	Hs	molecular function	671	0.0
protein binding	Hs	molecular function	671	0.0
nucleus	Hs	cellular component	671	0.0
nucleoplasm	Hs	cellular component	671	0.0
nucleolus	Hs	cellular component	359	8.26e-109
cytosol	Hs	cellular component	671	0.0
membrane	Hs	cellular component	671	0.0
transferase activity	Hs	molecular function	671	0.0
syntaxin-1 binding	Hs	molecular function	671	0.0
extrinsic component of membrane	Hs	cellular component	671	0.0
ubiquitin conjugating enzyme binding	Hs	molecular function	671	0.0
ubiquitin protein ligase binding	Hs	molecular function	671	0.0
HULC complex	Hs	cellular component	671	0.0
histone binding	Hs	molecular function	359	8.26e-109
protein homodimerization activity	Hs	molecular function	671	0.0
neuron projection	Hs	cellular component	671	0.0
axon terminus	Hs	cellular component	671	0.0
metal ion binding	Hs	molecular function	671	0.0

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
ubiquitin-protein transferase activity	PANTHER	molecular function	8.3E-265
histone monoubiquitination	PANTHER	biological process	8.3E-265
metal ion binding	Pfam	molecular function	8.5E-5

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences