Gene Card
Best human hits
CARMIL1; CARMIL2; CARMIL3
Unique Gene ID
Cirobu.g00002214
Gene Model ID
KH2012:KH.C11.385
Location
KhC11:5087091..5101691
Transcript Models and Sequences
KH2012:KH.C11.385.v1.B.nonSL4-1
KH2012:KH.C11.385.v1.B.nonSL5-1
KH2012:KH.C11.385.v1.B.nonSL6-1
KH2012:KH.C11.385.v1.B.nonSL7-1
KH2012:KH.C11.385.v1.B.nonSL8-1
KH2012:KH.C11.385.v1.R.ND2-1
KH2012:KH.C11.385.v2.B.ND3-1
KH2012:KH.C11.385.v3.B.ND1-1
KH2012:KH.C11.385.v4.B.SL9-1
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000020622 |
| ENSEMBL | ENSCING00000022967 |
Gene collection 1 (N. Satoh)
1 result
cieg040h09
Plate: R1CiGC21p14
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| CARMIL_C | Pfam | CARMIL, C-terminal domain |
| Leu-rich_rpt | Pfam | Leucine-rich repeat |
| LRR_dom_sf | Gene3D | Leucine-rich repeat domain superfamily |
| PH-like_dom_sf | Gene3D | PH-like domain superfamily |
| CARMIL1 | PANTHER | Leucine-rich repeat-containing protein 16A |
GOSlim
31 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| cytoskeleton | Orthology | cellular component |
| plasma membrane | Orthology | cellular component |
| blood coagulation | Orthology | biological process |
| membrane | Orthology | cellular component |
| cell migration | Orthology | biological process |
| nuclear speck | Orthology | cellular component |
| lamellipodium | Orthology | cellular component |
| cell leading edge | Orthology | cellular component |
| cell projection | Orthology | cellular component |
| macromolecular complex binding | Orthology | molecular function |
| extracellular exosome | Orthology | cellular component |
| plasma membrane region | Orthology | cellular component |
| anion binding | Orthology | molecular function |
| organelle organization | Orthology | biological process |
| cellular process | Orthology | biological process |
| cell projection assembly | Orthology | biological process |
| intracellular part | Orthology | cellular component |
| plasma membrane part | Orthology | cellular component |
| cell projection organization | Orthology | biological process |
| cytoskeletal part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| wound healing | Orthology | biological process |
| anatomical structure morphogenesis | Orthology | biological process |
| membrane organization | Orthology | biological process |
| endosome | Orthology | cellular component |
| cell morphogenesis involved in differentiation | Orthology | biological process |
| cell adhesion | Orthology | biological process |
GO (Orthology)
39 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| ruffle | Hs | cellular component |
| protein binding | Hs | molecular function |
| phospholipid binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| cytosol | Hs | cellular component |
| cytoskeleton | Hs | cellular component |
| plasma membrane | Hs | cellular component |
| actin filament organization | Hs | biological process |
| establishment or maintenance of cell polarity | Hs | biological process |
| blood coagulation | Hs | biological process |
| positive regulation of lamellipodium assembly | Hs | biological process |
| actin cytoskeleton | Hs | cellular component |
| membrane | Hs | cellular component |
| cell migration | Hs | biological process |
| nuclear speck | Hs | cellular component |
| maintenance of cell polarity | Hs | biological process |
| lamellipodium | Hs | cellular component |
| lamellipodium assembly | Hs | biological process |
| positive regulation of cell migration | Hs | biological process |
| positive regulation of actin filament polymerization | Hs | biological process |
| extrinsic component of cytoplasmic side of plasma membrane | Hs | cellular component |
| cell leading edge | Hs | cellular component |
| ruffle organization | Hs | biological process |
| filamentous actin | Hs | cellular component |
| cell projection | Hs | cellular component |
| wound healing, spreading of cells | Hs | biological process |
| macropinocytosis | Hs | biological process |
| macropinosome | Hs | cellular component |
| macromolecular complex binding | Hs | molecular function |
| intermediate filament cytoskeleton | Hs | cellular component |
| positive regulation of stress fiber assembly | Hs | biological process |
| barbed-end actin filament uncapping | Hs | biological process |
| actin filament network formation | Hs | biological process |
| extracellular exosome | Hs | cellular component |
| positive regulation of substrate adhesion-dependent cell spreading | Hs | biological process |
| positive regulation of ruffle assembly | Hs | biological process |
| positive regulation of lamellipodium organization | Hs | biological process |
| negative regulation of barbed-end actin filament capping | Hs | biological process |
GO (Blast)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| ruffle | Hs | cellular component | 399 | 4.52e-119 |
| protein binding | Hs | molecular function | 627 | 0.0 |
| phospholipid binding | Hs | molecular function | 399 | 4.52e-119 |
| nucleus | Hs | cellular component | 627 | 0.0 |
| cytoplasm | Hs | cellular component | 627 | 0.0 |
| cytosol | Hs | cellular component | 627 | 0.0 |
| cytoskeleton | Hs | cellular component | 627 | 0.0 |
| plasma membrane | Hs | cellular component | 627 | 0.0 |
| actin cytoskeleton | Hs | cellular component | 399 | 4.52e-119 |
| membrane | Hs | cellular component | 627 | 0.0 |
| nuclear speck | Hs | cellular component | 627 | 0.0 |
| lamellipodium | Hs | cellular component | 627 | 0.0 |
| extrinsic component of cytoplasmic side of plasma membrane | Hs | cellular component | 399 | 4.52e-119 |
| cell leading edge | Hs | cellular component | 627 | 0.0 |
| filamentous actin | Hs | cellular component | 627 | 0.0 |
| cell projection | Hs | cellular component | 627 | 0.0 |
| macropinosome | Hs | cellular component | 627 | 0.0 |
| macromolecular complex binding | Hs | molecular function | 627 | 0.0 |
| intermediate filament cytoskeleton | Hs | cellular component | 399 | 4.52e-119 |
| extracellular exosome | Hs | cellular component | 627 | 0.0 |
GO (InterProScan)
6 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | Pfam | molecular function | 0.018 |
| lamellipodium | PANTHER | cellular component | 3.0E-234 |
| positive regulation of cell migration | PANTHER | biological process | 3.0E-234 |
| barbed-end actin filament uncapping | PANTHER | biological process | 3.0E-234 |
| positive regulation of lamellipodium organization | PANTHER | biological process | 3.0E-234 |
| negative regulation of barbed-end actin filament capping | PANTHER | biological process | 3.0E-234 |
