Aniseed - Gene card

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000019194
NCBI Reference Sequence	NM_001078276.1
NCBI Reference Sequence	XM_009861786.2
NCBI Reference Sequence	XM_018813871.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg034e14

Plate: R1CiGC21g17

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term	Analysis	Definition
Interferon_reg_fact_DNA-bd_dom	Pfam	Interferon regulatory factor DNA-binding domain
Interferon_reg_fact_DNA-bd_dom	ProSiteProfiles	Interferon regulatory factor DNA-binding domain
SMAD_FHA_dom_sf	SUPERFAMILY	SMAD/FHA domain superfamily
WH_DNA-bd_sf	SUPERFAMILY	Winged helix DNA-binding domain superfamily
Interferon_reg_fact_DNA-bd_dom	PRINTS	Interferon regulatory factor DNA-binding domain
Interferon_reg_factor-3	SMART	Interferon regulatory factor-3
Interferon_reg_factor-3	Pfam	Interferon regulatory factor-3
Interferon_reg_fact_DNA-bd_dom	PANTHER	Interferon regulatory factor DNA-binding domain
SMAD-like_dom_sf	Gene3D	SMAD-like domain superfamily
Interferon_reg_fact_DNA-bd_dom	SMART	Interferon regulatory factor DNA-binding domain
WH-like_DNA-bd_sf	Gene3D	Winged helix-like DNA-binding domain superfamily

GOSlim

22 results

GO Term	Annotation Origin	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Blast	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Blast	molecular function
DNA binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
focal adhesion	Blast	cellular component
regulation of transcription, DNA-templated	InterProScan	biological process
transcription factor binding	Blast	molecular function
membrane	Blast	cellular component
sequence-specific DNA binding	Blast	molecular function
transcription regulatory region DNA binding	Blast	molecular function
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear lumen	Blast	cellular component
macromolecular complex	Blast	cellular component
transferase activity	Blast	molecular function
cellular protein modification process	Blast	biological process

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear nucleosome	Hs	cellular component	67.4	8.25e-12
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	66.6	1.30e-11
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	67.4	8.25e-12
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	67.4	8.25e-12
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	67.4	8.25e-12
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	66.6	1.30e-11
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	61.6	3.83e-10
DNA binding	Hs	molecular function	67.4	8.25e-12
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	67.4	8.25e-12
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	66.6	1.30e-11
protein binding	Hs	molecular function	67.4	8.25e-12
nucleus	Hs	cellular component	67.4	8.25e-12
nucleoplasm	Hs	cellular component	67.4	8.25e-12
cytoplasm	Hs	cellular component	66.6	1.30e-11
cytosol	Hs	cellular component	67.4	8.25e-12
focal adhesion	Hs	cellular component	61.6	3.83e-10
transcription factor binding	Hs	molecular function	67.4	8.25e-12
membrane	Hs	cellular component	67.4	8.25e-12
protein-lysine N-methyltransferase activity	Hs	molecular function	67.4	8.25e-12
sequence-specific DNA binding	Hs	molecular function	67.4	8.25e-12
transcription regulatory region DNA binding	Hs	molecular function	67.4	8.25e-12

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	Pfam	molecular function	3.9E-44
protein binding	SUPERFAMILY	molecular function	1.49E-28
regulation of transcription, DNA-templated	Pfam	biological process	3.9E-44
transcription regulatory region DNA binding	PANTHER	molecular function	5.2E-118

Gene Card

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Transcript Models and Sequences