Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000002994
ENSEMBL	ENSCING00000010863
ENSEMBL	ENSCING00000024365

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

ciht011j15

Plate: R1CiGC43m14

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Helicase/UvrB_N	Pfam	Helicase/UvrB, N-terminal
Helicase_C	SMART	Helicase, C-terminal
Helicase_C	Pfam	Helicase, C-terminal
Helicase_ATP-bd	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
Helicase_C	CDD	Helicase, C-terminal
Helicase_C	ProSiteProfiles	Helicase, C-terminal
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain

GOSlim

39 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
double-stranded DNA binding	Blast	molecular function
RNA binding	Blast	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
plasma membrane	Blast	cellular component
DNA repair	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
zinc ion binding	Blast	molecular function
membrane	Blast	cellular component
hydrolase activity	Orthology	molecular function
cell junction	Blast	cellular component
axon	Blast	cellular component
ubiquitin protein ligase binding	Blast	molecular function
identical protein binding	Blast	molecular function
cell projection	Blast	cellular component
metal ion binding	Blast	molecular function
extracellular exosome	Blast	cellular component
reproductive process	Orthology	biological process
DNA metabolic process	Orthology	biological process
nucleoside-triphosphatase activity	Orthology	molecular function
DNA replication	Orthology	biological process
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
RNA metabolic process	Blast	biological process
cytoplasmic part	Blast	cellular component
intracellular membrane-bounded organelle	Blast	cellular component
cell projection part	Blast	cellular component
cell projection membrane	Blast	cellular component
cell leading edge	Blast	cellular component
nuclear part	Blast	cellular component

GO (Orthology)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
resolution of meiotic recombination intermediates	Hs	biological process
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
helicase activity	Hs	molecular function
nuclease activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
DNA repair	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
hydrolase activity	Hs	molecular function
replication fork processing	Hs	biological process
interstrand cross-link repair	Hs	biological process
Fanconi anaemia nuclear complex	Hs	cellular component
FANCM-MHF complex	Hs	cellular component
nucleic acid phosphodiester bond hydrolysis	Hs	biological process

GO (Blast)

47 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	684	0.0
nucleic acid binding	Hs	molecular function	684	0.0
DNA binding	Hs	molecular function	684	0.0
chromatin binding	Hs	molecular function	684	0.0
double-stranded DNA binding	Hs	molecular function	97.1	3.80e-20
RNA binding	Hs	molecular function	97.1	3.80e-20
double-stranded RNA binding	Hs	molecular function	97.1	3.80e-20
single-stranded RNA binding	Hs	molecular function	97.1	3.80e-20
helicase activity	Hs	molecular function	684	0.0
nuclease activity	Hs	molecular function	684	0.0
endonuclease activity	Hs	molecular function	56.6	1.20e-07
endoribonuclease activity	Hs	molecular function	56.6	1.20e-07
ribonuclease III activity	Hs	molecular function	56.6	1.20e-07
deoxyribonuclease I activity	Hs	molecular function	56.6	1.20e-07
protein binding	Hs	molecular function	684	0.0
ATP binding	Hs	molecular function	684	0.0
nucleus	Hs	cellular component	684	0.0
nucleoplasm	Hs	cellular component	684	0.0
cytoplasm	Hs	cellular component	97.1	3.80e-20
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component	56.6	1.20e-07
cytosol	Hs	cellular component	97.1	3.80e-20
cytoskeleton	Hs	cellular component	97.1	3.80e-20
plasma membrane	Hs	cellular component	97.1	3.80e-20
bicellular tight junction	Hs	cellular component	97.1	3.80e-20
zinc ion binding	Hs	molecular function	97.1	3.80e-20
actin cytoskeleton	Hs	cellular component	97.1	3.80e-20
membrane	Hs	cellular component	97.1	3.80e-20
hydrolase activity	Hs	molecular function	684	0.0
endoribonuclease activity, producing 5'-phosphomonoesters	Hs	molecular function	56.6	1.20e-07
protein domain specific binding	Hs	molecular function	56.6	1.20e-07
cell junction	Hs	cellular component	97.1	3.80e-20
axon	Hs	cellular component	56.6	1.20e-07
dendrite	Hs	cellular component	56.6	1.20e-07
growth cone	Hs	cellular component	56.6	1.20e-07
ubiquitin protein ligase binding	Hs	molecular function	97.1	3.80e-20
ruffle membrane	Hs	cellular component	97.1	3.80e-20
ARC complex	Hs	cellular component	56.6	1.20e-07
micro-ribonucleoprotein complex	Hs	cellular component	56.6	1.20e-07
siRNA binding	Hs	molecular function	56.6	1.20e-07
identical protein binding	Hs	molecular function	97.1	3.80e-20
cell projection	Hs	cellular component	97.1	3.80e-20
Fanconi anaemia nuclear complex	Hs	cellular component	684	0.0
metal ion binding	Hs	molecular function	97.1	3.80e-20
extracellular exosome	Hs	cellular component	56.6	1.20e-07
RISC-loading complex	Hs	cellular component	56.6	1.20e-07
pre-miRNA binding	Hs	molecular function	56.6	1.20e-07
FANCM-MHF complex	Hs	cellular component	684	0.0

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	Pfam	molecular function	6.1E-20
ATP binding	Pfam	molecular function	6.1E-20
hydrolase activity	Pfam	molecular function	6.1E-20

Gene Card

Best human hits

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Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences