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Gene Card

Best human hits

PAFAH1B1; WDR5; WDR5B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002454

Gene Model ID

KH2012:KH.C11.607

Location

KhC11:4467521..4474350

Transcript Models and Sequences

  KH2012:KH.C11.607.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000021752
NCBI Reference Sequence XM_002131254.4
Collections

Gateway full ORF

2 results

cien85792

Plate: VES83_H20

cien136633

Plate: VES91_G16

Gene collection 1 (N. Satoh)

2 results

cicl041f23

Plate: R1CiGC12d13

cilv020g01

Plate: R1CiGC26f06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term Analysis Definition
LisH ProSiteProfiles LIS1 homology motif
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
LIS1_N SUPERFAMILY LIS1, N-terminal
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat ProSiteProfiles WD40 repeat
LisH Pfam LIS1 homology motif
WD40_repeat Pfam WD40 repeat
WD40_repeat SMART WD40 repeat
Dynein_regulator_LIS1 PIRSF Dynein regulator LIS1
Dynein_regulator_LIS1 Hamap Dynein regulator LIS1
LisH SMART LIS1 homology motif
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily

GOSlim

81 results

GO Term Annotation Origin Type
G2/M transition of mitotic cell cycle Orthology biological process
protein binding Orthology molecular function
intracellular Blast cellular component
nucleus Orthology cellular component
nuclear envelope Orthology cellular component
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
centrosome Orthology cellular component
microtubule organizing center Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
microtubule Orthology cellular component
microtubule-based process Orthology biological process
cell cycle Orthology biological process
chemical synaptic transmission Orthology biological process
multicellular organism development Orthology biological process
nervous system development Orthology biological process
brain development Orthology biological process
microtubule binding Orthology molecular function
microtubule cytoskeleton Orthology cellular component
membrane Orthology cellular component
cell migration Orthology biological process
cell differentiation Orthology biological process
axon Orthology cellular component
neuron projection development Orthology biological process
cell leading edge Orthology cellular component
nuclear membrane Orthology cellular component
vesicle Orthology cellular component
protein homodimerization activity Orthology molecular function
neuron projection Orthology cellular component
neuronal cell body Orthology cellular component
regulation of GTPase activity Orthology biological process
perinuclear region of cytoplasm Orthology cellular component
cell division Orthology biological process
extracellular exosome Orthology cellular component
organelle organization Orthology biological process
cytoplasmic part Orthology cellular component
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
spermatogenesis Orthology biological process
cell development Orthology biological process
generation of neurons Orthology biological process
hydrolase activity Orthology molecular function
cytoskeletal part Orthology cellular component
cell periphery Orthology cellular component
organic substance metabolic process Orthology biological process
intracellular transport Orthology biological process
gamete generation Orthology biological process
cell proliferation Orthology biological process
nervous system process Orthology biological process
cell projection part Orthology cellular component
microtubule-based movement Orthology biological process
anion binding Orthology molecular function
carbohydrate derivative binding Orthology molecular function
protein transport Orthology biological process
cellular process Orthology biological process
neuron differentiation Orthology biological process
organelle Orthology cellular component
cell projection Orthology cellular component
plasma membrane region Orthology cellular component
cluster of actin-based cell projections Orthology cellular component
cytoskeletal protein binding Orthology molecular function
immune system process Orthology biological process
animal organ development Orthology biological process
anatomical structure morphogenesis Orthology biological process
enzyme binding Orthology molecular function
axonogenesis Orthology biological process
intracellular signal transduction Orthology biological process
cellular response to stress Orthology biological process
negative regulation of signal transduction Orthology biological process
protein phosphorylation Orthology biological process
membrane organization Orthology biological process
neuron development Orthology biological process
cell morphogenesis involved in neuron differentiation Orthology biological process
neuron projection morphogenesis Orthology biological process
macromolecular complex binding Orthology molecular function
microtubule motor activity Orthology molecular function
nucleoplasm part Blast cellular component
transferase activity Blast molecular function
cellular protein modification process Blast biological process

GO (Orthology)

91 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
G2/M transition of mitotic cell cycle Hs biological process
establishment of mitotic spindle orientation Hs biological process
microtubule cytoskeleton organization Hs biological process
astral microtubule Hs cellular component
kinetochore Hs cellular component
ameboidal-type cell migration Hs biological process
acrosome assembly Hs biological process
neuron migration Hs biological process
phospholipase A2 activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nuclear envelope Hs cellular component
cytoplasm Hs cellular component
centrosome Hs cellular component
microtubule organizing center Hs cellular component
spindle Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
kinesin complex Hs cellular component
microtubule Hs cellular component
microtubule associated complex Hs cellular component
cell cortex Hs cellular component
lipid metabolic process Hs biological process
microtubule-based process Hs biological process
cell cycle Hs biological process
sister chromatid cohesion Hs biological process
nuclear migration Hs biological process
chemical synaptic transmission Hs biological process
multicellular organism development Hs biological process
germ cell development Hs biological process
nervous system development Hs biological process
neuroblast proliferation Hs biological process
brain development Hs biological process
learning or memory Hs biological process
microtubule binding Hs molecular function
retrograde axonal transport Hs biological process
heparin binding Hs molecular function
adult locomotory behavior Hs biological process
protein secretion Hs biological process
regulation of G2/M transition of mitotic cell cycle Hs biological process
negative regulation of neuron projection development Hs biological process
microtubule cytoskeleton Hs cellular component
membrane Hs cellular component
lipid catabolic process Hs biological process
cell migration Hs biological process
stem cell division Hs biological process
transmission of nerve impulse Hs biological process
cerebral cortex neuron differentiation Hs biological process
cerebral cortex development Hs biological process
actin cytoskeleton organization Hs biological process
cell differentiation Hs biological process
axon Hs cellular component
growth cone Hs cellular component
microtubule organizing center organization Hs biological process
cell leading edge Hs cellular component
motile cilium Hs cellular component
nuclear membrane Hs cellular component
vesicle Hs cellular component
stereocilium Hs cellular component
dynactin binding Hs molecular function
osteoclast development Hs biological process
positive regulation of embryonic development Hs biological process
establishment of planar polarity of embryonic epithelium Hs biological process
protein homodimerization activity Hs molecular function
neuron projection Hs cellular component
neuronal cell body Hs cellular component
regulation of GTPase activity Hs biological process
phospholipase binding Hs molecular function
cortical microtubule organization Hs biological process
dynein intermediate chain binding Hs molecular function
positive regulation of axon extension Hs biological process
positive regulation of mitotic cell cycle Hs biological process
negative regulation of JNK cascade Hs biological process
vesicle transport along microtubule Hs biological process
perinuclear region of cytoplasm Hs cellular component
brain morphogenesis Hs biological process
neuromuscular process controlling balance Hs biological process
nuclear envelope disassembly Hs biological process
phosphoprotein binding Hs molecular function
cell division Hs biological process
establishment of centrosome localization Hs biological process
maintenance of centrosome location Hs biological process
auditory receptor cell development Hs biological process
positive regulation of dendritic spine morphogenesis Hs biological process
extracellular exosome Hs cellular component
regulation of microtubule cytoskeleton organization Hs biological process
dynein complex binding Hs molecular function
microtubule cytoskeleton organization involved in establishment of planar polarity Hs biological process
central region of growth cone Hs cellular component
axon cytoplasm Hs cellular component
regulation of microtubule motor activity Hs biological process

GO (Blast)

54 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
histone acetyltransferase complex Hs cellular component 171 6.44e-50
astral microtubule Hs cellular component 639 0.0
kinetochore Hs cellular component 639 0.0
phospholipase A2 activity Hs molecular function 639 0.0
protein binding Hs molecular function 639 0.0
intracellular Hs cellular component 171 6.44e-50
nucleus Hs cellular component 639 0.0
nuclear envelope Hs cellular component 639 0.0
nucleoplasm Hs cellular component 171 6.44e-50
Ada2/Gcn5/Ada3 transcription activator complex Hs cellular component 171 6.44e-50
cytoplasm Hs cellular component 639 0.0
centrosome Hs cellular component 639 0.0
microtubule organizing center Hs cellular component 639 0.0
spindle Hs cellular component 639 0.0
cytosol Hs cellular component 639 0.0
cytoskeleton Hs cellular component 639 0.0
kinesin complex Hs cellular component 639 0.0
microtubule Hs cellular component 639 0.0
microtubule associated complex Hs cellular component 639 0.0
cell cortex Hs cellular component 639 0.0
microtubule binding Hs molecular function 639 0.0
heparin binding Hs molecular function 639 0.0
microtubule cytoskeleton Hs cellular component 639 0.0
membrane Hs cellular component 639 0.0
histone-lysine N-methyltransferase activity Hs molecular function 171 6.44e-50
axon Hs cellular component 639 0.0
growth cone Hs cellular component 639 0.0
cell leading edge Hs cellular component 639 0.0
motile cilium Hs cellular component 639 0.0
nuclear membrane Hs cellular component 639 0.0
vesicle Hs cellular component 639 0.0
stereocilium Hs cellular component 639 0.0
dynactin binding Hs molecular function 639 0.0
methylated histone binding Hs molecular function 171 6.44e-50
histone methyltransferase complex Hs cellular component 171 6.44e-50
ciliary basal body Hs cellular component 171 6.44e-50
histone methyltransferase activity (H3-K4 specific) Hs molecular function 171 6.44e-50
protein homodimerization activity Hs molecular function 639 0.0
neuron projection Hs cellular component 639 0.0
neuronal cell body Hs cellular component 639 0.0
phospholipase binding Hs molecular function 639 0.0
histone acetyltransferase activity (H4-K5 specific) Hs molecular function 171 6.44e-50
histone acetyltransferase activity (H4-K8 specific) Hs molecular function 171 6.44e-50
MLL3/4 complex Hs cellular component 171 6.44e-50
dynein intermediate chain binding Hs molecular function 639 0.0
histone acetyltransferase activity (H4-K16 specific) Hs molecular function 171 6.44e-50
Set1C/COMPASS complex Hs cellular component 171 6.44e-50
perinuclear region of cytoplasm Hs cellular component 639 0.0
phosphoprotein binding Hs molecular function 639 0.0
extracellular exosome Hs cellular component 639 0.0
dynein complex binding Hs molecular function 639 0.0
MLL1 complex Hs cellular component 171 6.44e-50
central region of growth cone Hs cellular component 639 0.0
axon cytoplasm Hs cellular component 639 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 7.6E-134

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