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GENE CARD

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Gene Card

Best human hits

CD22; HMCN2; MALT1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002488

Gene Model ID

KH2012:KH.C11.638

Location

KhC11:496430..505876

Transcript Models and Sequences

  KH2012:KH.C11.638.v1.A.ND2-1
KH2012:KH.C11.638.v1.A.SL1-1
KH2012:KH.C11.638.v1.A.SL3-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000021118
NCBI Reference Sequence XM_002123759.4
Collections

Gateway full ORF

4 results

cien39884

Plate: VES76_O15

cien61150

Plate: VES79_D22

cien62005

Plate: VES79_P24

cien195979

Plate: VES100_C17

Gene collection 1 (N. Satoh)

1 result

ciht011a11

Plate: R1CiGC43m02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Ig_sub2 SMART Immunoglobulin subtype 2
Caspase-like_dom_sf SUPERFAMILY Caspase-like domain superfamily
Ig-like_dom ProSiteProfiles Immunoglobulin-like domain
Ig-like_dom_sf SUPERFAMILY Immunoglobulin-like domain superfamily
Ig-like_fold Gene3D Immunoglobulin-like fold
Ig_sub SMART Immunoglobulin subtype
Pept_C14_p20 ProSiteProfiles Peptidase C14, p20 domain

GOSlim

29 results

GO Term Annotation Origin Type
ubiquitin-protein transferase activity Blast molecular function
signal transducer activity Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
nucleus Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
proteolysis InterProScan biological process
peptidase activity Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
hydrolase activity Blast molecular function
cell junction Blast cellular component
macromolecular complex Blast cellular component
identical protein binding Blast molecular function
perinuclear region of cytoplasm Blast cellular component
extracellular exosome Blast cellular component
enzyme binding Blast molecular function
endopeptidase activity Blast molecular function
extracellular region part Blast cellular component
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
kinase activity Blast molecular function
enzyme activator activity Blast molecular function
binding Blast molecular function
plasma membrane region Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
fibrillar center Hs cellular component 203 4.84e-56
protease binding Hs molecular function 203 4.84e-56
cysteine-type endopeptidase activity Hs molecular function 203 4.84e-56
ubiquitin-protein transferase activity Hs molecular function 203 4.84e-56
signal transducer activity Hs molecular function 203 4.84e-56
calcium ion binding Hs molecular function 43.1 5.55e-04
protein binding Hs molecular function 203 4.84e-56
extracellular region Hs cellular component 43.1 5.55e-04
proteinaceous extracellular matrix Hs cellular component 43.1 5.55e-04
basement membrane Hs cellular component 43.1 5.55e-04
nucleus Hs cellular component 203 4.84e-56
nucleolus Hs cellular component 203 4.84e-56
cytoplasm Hs cellular component 203 4.84e-56
cytosol Hs cellular component 203 4.84e-56
plasma membrane Hs cellular component 203 4.84e-56
cell cortex Hs cellular component 43.1 5.55e-04
peptidase activity Hs molecular function 203 4.84e-56
membrane Hs cellular component 47.4 2.46e-05
integral component of membrane Hs cellular component 47.4 2.46e-05
hydrolase activity Hs molecular function 203 4.84e-56
kinase activator activity Hs molecular function 203 4.84e-56
cell junction Hs cellular component 43.1 5.55e-04
carbohydrate binding Hs molecular function 47.4 2.46e-05
extracellular matrix Hs cellular component 43.1 5.55e-04
cleavage furrow Hs cellular component 43.1 5.55e-04
CBM complex Hs cellular component 203 4.84e-56
macromolecular complex Hs cellular component 203 4.84e-56
identical protein binding Hs molecular function 203 4.84e-56
protein self-association Hs molecular function 203 4.84e-56
perinuclear region of cytoplasm Hs cellular component 203 4.84e-56
extracellular exosome Hs cellular component 47.4 2.46e-05

GO (InterProScan)

2 results

GO Term Analysis Type e-value
cysteine-type endopeptidase activity ProSiteProfiles molecular function 11.076
proteolysis ProSiteProfiles biological process 11.076

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