Aniseed - Gene card

Gene Card

Best human hits

CPVL; CTSA; SCPEP1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002503

Gene Model ID

KH2012:KH.C11.652

Location

KhC11:488648..496086

Transcript Models and Sequences

KH2012:KH.C11.652.v1.A.ND1-1
KH2012:KH.C11.652.v2.A.SL2-1
KH2012:KH.C11.652.v2.A.SL3-1
KH2012:KH.C11.652.v3.A.SL4-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000019548
NCBI Reference Sequence	XM_002128682.2

Collections

Gateway full ORF

1 result

Gene collection 1 (N. Satoh)

1 result

cicl026n22

Plate: R1CiGC11b16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
AB_hydrolase	SUPERFAMILY	Alpha/Beta hydrolase fold
AB_hydrolase	Gene3D	Alpha/Beta hydrolase fold
Ser_caboxypep_his_AS	ProSitePatterns	Serine carboxypeptidases, histidine active site
Peptidase_S10	PRINTS	Peptidase S10, serine carboxypeptidase
Peptidase_S10	Pfam	Peptidase S10, serine carboxypeptidase
Peptidase_S10	PANTHER	Peptidase S10, serine carboxypeptidase

GOSlim

20 results

GO Term	Annotation Origin	Type
extracellular region	Blast	cellular component
nucleoplasm	Blast	cellular component
lysosome	Blast	cellular component
lysosomal membrane	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
cytosol	Blast	cellular component
proteolysis	InterProScan	biological process
enzyme activator activity	Blast	molecular function
peptidase activity	Blast	molecular function
membrane	Blast	cellular component
hydrolase activity	Blast	molecular function
intracellular membrane-bounded organelle	Blast	cellular component
extracellular exosome	Blast	cellular component
peptidase activity, acting on L-amino acid peptides	Blast	molecular function
serine-type peptidase activity	Blast	molecular function
cytoplasmic vesicle	Blast	cellular component
vacuolar part	Blast	cellular component
endomembrane system	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
membrane part	Blast	cellular component

GO (Orthology)