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GENE CARD

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Gene Card

Best human hits

NUDT9; TRPM2; TRPM5

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002512

Gene Model ID

KH2012:KH.C11.660

Location

KhC11:3401350..3424824

Transcript Models and Sequences

  KH2012:KH.C11.660.v1.A.ND1-1

External Database Gene Card

External database links

6 results

Database Gene ID
ENSEMBL ENSCING00000018221
ENSEMBL ENSCING00000023499
NCBI Reference Sequence XM_009861946.2
NCBI Reference Sequence XM_009862026.1
NCBI Reference Sequence XM_018813899.1
NCBI Reference Sequence XM_018813900.1
Collections

Gateway full ORF

2 results

cien161031

Plate: VES95_P05

cien218606

Plate: VES104_O05

Gene collection 1 (N. Satoh)

1 result

cign069h03

Plate: R1CiGC42l04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
NUDIX_hydrolase_dom Pfam NUDIX hydrolase domain
TRPM2 PANTHER Transient receptor potential cation channel subfamily M member 2
Ion_trans_dom Pfam Ion transport domain
NUDIX_hydrolase_dom ProSiteProfiles NUDIX hydrolase domain
NUDIX_hydrolase-like_dom_sf SUPERFAMILY NUDIX hydrolase-like domain superfamily

GOSlim

67 results

GO Term Annotation Origin Type
calcium ion binding Orthology molecular function
intracellular Blast cellular component
mitochondrion Blast cellular component
mitochondrial matrix Blast cellular component
lysosome Orthology cellular component
lysosomal membrane Orthology cellular component
plasma membrane Orthology cellular component
integral component of plasma membrane Orthology cellular component
ion transport Orthology biological process
cation transport Orthology biological process
sodium ion transport Orthology biological process
response to oxidative stress Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
hydrolase activity Orthology molecular function
cytoplasmic vesicle Orthology cellular component
cell projection Orthology cellular component
neuron projection Orthology cellular component
neuronal cell body Orthology cellular component
transmembrane transport Orthology biological process
extracellular exosome Blast cellular component
nucleotide binding Orthology molecular function
immune system process Orthology biological process
protein binding Orthology molecular function
calmodulin binding Orthology molecular function
ATP binding Orthology molecular function
nucleoplasm Orthology cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
positive regulation of cell proliferation Orthology biological process
protein homodimerization activity Orthology molecular function
membrane raft Orthology cellular component
response to stimulus Orthology biological process
positive regulation of canonical Wnt signaling pathway Orthology biological process
cell migration Orthology biological process
chemotaxis Orthology biological process
metal ion transport Orthology biological process
monovalent inorganic cation transport Orthology biological process
response to stress Orthology biological process
intracellular signal transduction Orthology biological process
intracellular organelle part Orthology cellular component
organelle membrane Orthology cellular component
protein transport Orthology biological process
cell-cell signaling Orthology biological process
whole membrane Orthology cellular component
endomembrane system Orthology cellular component
bounding membrane of organelle Orthology cellular component
pyrophosphatase activity Orthology molecular function
sensory perception Orthology biological process
cell projection assembly Orthology biological process
cellular response to stress Orthology biological process
animal organ development Orthology biological process
cell differentiation Orthology biological process
cellular process Orthology biological process
positive regulation of cell death Orthology biological process
organelle organization Orthology biological process
immune response Orthology biological process
cell Orthology cellular component
plasma membrane part Orthology cellular component
cell surface Orthology cellular component
protein modification by small protein conjugation Orthology biological process
macromolecular complex Orthology cellular component
cellular response to organic substance Orthology biological process
protein homooligomerization Orthology biological process
signaling Orthology biological process

GO (Orthology)

99 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
temperature homeostasis Hs biological process
dendritic cell chemotaxis Hs biological process
ion channel activity Hs molecular function
calcium activated cation channel activity Hs molecular function
voltage-gated ion channel activity Hs molecular function
cation channel activity Hs molecular function
calcium channel activity Hs molecular function
potassium channel activity Hs molecular function
sodium channel activity Hs molecular function
manganese ion transmembrane transporter activity Hs molecular function
calcium ion binding Hs molecular function
lysosome Hs cellular component
lysosomal membrane Hs cellular component
plasma membrane Hs cellular component
integral component of plasma membrane Hs cellular component
ion transport Hs biological process
cation transport Hs biological process
sodium ion transport Hs biological process
calcium ion transport Hs biological process
manganese ion transport Hs biological process
response to oxidative stress Hs biological process
response to heat Hs biological process
calcium-release channel activity Hs molecular function
membrane Hs cellular component
integral component of membrane Hs cellular component
hydrolase activity Hs molecular function
dendrite Hs cellular component
cytoplasmic vesicle membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
positive regulation of insulin secretion Hs biological process
ion transmembrane transport Hs biological process
regulation of ion transmembrane transport Hs biological process
specific granule membrane Hs cellular component
sodium ion transmembrane transport Hs biological process
cell projection Hs cellular component
neuron projection Hs cellular component
neuronal cell body Hs cellular component
perikaryon Hs cellular component
ADP-ribose diphosphatase activity Hs molecular function
sensory perception of taste Hs biological process
release of sequestered calcium ion into cytosol Hs biological process
regulation of filopodium assembly Hs biological process
transmembrane transport Hs biological process
cellular response to hydrogen peroxide Hs biological process
calcium ion transmembrane transport Hs biological process
tertiary granule membrane Hs cellular component
cellular response to calcium ion Hs biological process
manganese ion transmembrane transport Hs biological process
cellular response to temperature stimulus Hs biological process
zinc II ion transmembrane transport Hs biological process
potassium ion transmembrane transport Hs biological process
dendritic cell differentiation Hs biological process
cation transmembrane transport Hs biological process
calcium ion import across plasma membrane Hs biological process
ligand-gated calcium channel activity Hs molecular function
ficolin-1-rich granule membrane Hs cellular component
positive regulation of oxidative stress-induced neuron death Hs biological process
regulation of actin cytoskeleton reorganization Hs biological process
nucleotide binding Hs molecular function
adaptive immune response Hs biological process
immune system process Hs biological process
protein binding Hs molecular function
calmodulin binding Hs molecular function
ATP binding Hs molecular function
nucleoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
cellular calcium ion homeostasis Hs biological process
positive regulation of cytosolic calcium ion concentration Hs biological process
positive regulation of cell proliferation Hs biological process
response to temperature stimulus Hs biological process
response to cold Hs biological process
external side of plasma membrane Hs cellular component
positive regulation of heart rate Hs biological process
detection of temperature stimulus Hs biological process
protein sumoylation Hs biological process
calcium-mediated signaling Hs biological process
sodium channel complex Hs cellular component
positive regulation of insulin secretion involved in cellular response to glucose stimulus Hs biological process
vasoconstriction Hs biological process
regulation of membrane potential Hs biological process
protein homodimerization activity Hs molecular function
spanning component of plasma membrane Hs cellular component
membrane raft Hs cellular component
positive regulation of fat cell differentiation Hs biological process
negative regulation of osteoblast differentiation Hs biological process
positive regulation of vasoconstriction Hs biological process
response to stimulus Hs biological process
sensory perception of temperature stimulus Hs biological process
protein homotetramerization Hs biological process
cardiac conduction Hs biological process
protein homotrimerization Hs biological process
regulation of heart rate by cardiac conduction Hs biological process
spanning component of membrane Hs cellular component
positive regulation of canonical Wnt signaling pathway Hs biological process
inorganic cation transmembrane transport Hs biological process
sodium ion import across plasma membrane Hs biological process

GO (Blast)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ion channel activity Hs molecular function 465 2.92e-143
calcium activated cation channel activity Hs molecular function 296 1.67e-84
voltage-gated ion channel activity Hs molecular function 296 1.67e-84
cation channel activity Hs molecular function 465 2.92e-143
calcium channel activity Hs molecular function 465 2.92e-143
potassium channel activity Hs molecular function 296 1.67e-84
sodium channel activity Hs molecular function 465 2.92e-143
manganese ion transmembrane transporter activity Hs molecular function 465 2.92e-143
calcium ion binding Hs molecular function 465 2.92e-143
intracellular Hs cellular component 291 2.38e-90
mitochondrion Hs cellular component 291 2.38e-90
mitochondrial matrix Hs cellular component 291 2.38e-90
lysosome Hs cellular component 465 2.92e-143
lysosomal membrane Hs cellular component 465 2.92e-143
plasma membrane Hs cellular component 465 2.92e-143
integral component of plasma membrane Hs cellular component 465 2.92e-143
calcium-release channel activity Hs molecular function 465 2.92e-143
membrane Hs cellular component 465 2.92e-143
integral component of membrane Hs cellular component 465 2.92e-143
hydrolase activity Hs molecular function 465 2.92e-143
ADP-sugar diphosphatase activity Hs molecular function 291 2.38e-90
dendrite Hs cellular component 296 1.67e-84
cytoplasmic vesicle membrane Hs cellular component 465 2.92e-143
cytoplasmic vesicle Hs cellular component 465 2.92e-143
specific granule membrane Hs cellular component 465 2.92e-143
cell projection Hs cellular component 465 2.92e-143
neuron projection Hs cellular component 465 2.92e-143
neuronal cell body Hs cellular component 465 2.92e-143
perikaryon Hs cellular component 465 2.92e-143
adenosine-diphosphatase activity Hs molecular function 291 2.38e-90
ADP-ribose diphosphatase activity Hs molecular function 465 2.92e-143
extracellular exosome Hs cellular component 291 2.38e-90
tertiary granule membrane Hs cellular component 465 2.92e-143
ligand-gated calcium channel activity Hs molecular function 465 2.92e-143
ficolin-1-rich granule membrane Hs cellular component 465 2.92e-143

GO (InterProScan)

9 results

GO Term Analysis Type e-value
ion channel activity Pfam molecular function 1.5E-14
cation channel activity PANTHER molecular function 7.5E-193
ion transport Pfam biological process 1.5E-14
response to oxidative stress PANTHER biological process 7.5E-193
membrane Pfam cellular component 1.5E-14
hydrolase activity SUPERFAMILY molecular function 7.45E-40
ion transmembrane transport PANTHER biological process 7.5E-193
ADP-ribose diphosphatase activity PANTHER molecular function 7.5E-193
transmembrane transport Pfam biological process 1.5E-14

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