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Gene Card

Best human hits

TNNI1; TNNI2; TNNI3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002525

Gene Model ID

KH2012:KH.C11.673

Location

KhC11:1685197..1687579

Transcript Models and Sequences

  KH2012:KH.C11.673.v1.A.SL1-1
KH2012:KH.C11.673.v1.A.SL2-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000022966
Collections

Gateway full ORF

2 results

cima835427

Plate: VES62_C19

cima857638

Plate: VES64_A05

Gene collection 1 (N. Satoh)

1 result

citb5n24

Plate: R1CiGC29b15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

14 results

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Troponin_sf Gene3D Troponin domain superfamily
Troponin Pfam Troponin

GOSlim

27 results

GO Term Annotation Origin Type
actin binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
heart development Orthology biological process
protein kinase binding Orthology molecular function
positive regulation of transcription, DNA-templated Orthology biological process
metal ion binding Orthology molecular function
actin filament binding Orthology molecular function
blood vessel morphogenesis Orthology biological process
cell differentiation Orthology biological process
cytoplasmic part Orthology cellular component
cytoskeletal part Orthology cellular component
macromolecular complex Orthology cellular component
cellular process Orthology biological process
cell Orthology cellular component
intracellular signal transduction Orthology biological process
molecular function regulator Orthology molecular function
transmembrane transport Orthology biological process
metal ion transport Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
organelle part Orthology cellular component
cytoskeletal protein binding Orthology molecular function
nucleoside-triphosphatase activity Orthology molecular function
anatomical structure morphogenesis Orthology biological process
regulation of signaling Orthology biological process

GO (Orthology)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
vasculogenesis Hs biological process
skeletal muscle contraction Hs biological process
actin binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
troponin complex Hs cellular component
cellular calcium ion homeostasis Hs biological process
regulation of muscle contraction Hs biological process
regulation of smooth muscle contraction Hs biological process
striated muscle contraction Hs biological process
regulation of striated muscle contraction Hs biological process
heart development Hs biological process
regulation of cardiac muscle contraction by calcium ion signaling Hs biological process
calcium channel inhibitor activity Hs molecular function
protein kinase binding Hs molecular function
protein domain specific binding Hs molecular function
myofibril Hs cellular component
sarcomere Hs cellular component
troponin C binding Hs molecular function
troponin T binding Hs molecular function
negative regulation of ATPase activity Hs biological process
contractile fiber Hs cellular component
positive regulation of transcription, DNA-templated Hs biological process
metal ion binding Hs molecular function
calcium-dependent protein binding Hs molecular function
actin filament binding Hs molecular function
ventricular cardiac muscle tissue morphogenesis Hs biological process
heart contraction Hs biological process
cardiac muscle contraction Hs biological process
cardiac myofibril Hs cellular component
regulation of cardiac conduction Hs biological process
cardiac Troponin complex Hs cellular component

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
actin binding Hs molecular function 184 3.01e-59
protein binding Hs molecular function 184 3.01e-59
nucleus Hs cellular component 173 7.60e-55
cytoplasm Hs cellular component 167 3.88e-52
cytosol Hs cellular component 184 3.01e-59
troponin complex Hs cellular component 184 3.01e-59
calcium channel inhibitor activity Hs molecular function 167 3.88e-52
protein kinase binding Hs molecular function 167 3.88e-52
protein domain specific binding Hs molecular function 167 3.88e-52
myofibril Hs cellular component 167 3.88e-52
sarcomere Hs cellular component 167 3.88e-52
troponin C binding Hs molecular function 167 3.88e-52
troponin T binding Hs molecular function 173 7.60e-55
contractile fiber Hs cellular component 167 3.88e-52
metal ion binding Hs molecular function 184 3.01e-59
calcium-dependent protein binding Hs molecular function 167 3.88e-52
actin filament binding Hs molecular function 167 3.88e-52
cardiac myofibril Hs cellular component 167 3.88e-52
cardiac Troponin complex Hs cellular component 167 3.88e-52

GO (InterProScan)

1 result

GO Term Analysis Type e-value
troponin complex Pfam cellular component 1.2E-46

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