Login
Help

GENE CARD

Submit your Data

Gene Card

Unique Gene ID

Cirobu.g00002579

Gene Model ID

KH2012:KH.C11.722

Location

KhC11:1544412..1552946

Transcript Models and Sequences

  KH2012:KH.C11.722.v1.A.ND1-1

External Database Gene Card
Collections

Gateway full ORF

3 results

cien146524

Plate: VES93_F04

cien189736

Plate: VES99_G17

cien225170

Plate: VES105_M02

Gene collection 1 (N. Satoh)

2 results

cicl062i03

Plate: R1CiGC39a24

citb073j19

Plate: R1CiGC46e08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
SAM/pointed_sf SUPERFAMILY Sterile alpha motif/pointed domain superfamily
SAM Pfam Sterile alpha motif domain
SAM SMART Sterile alpha motif domain

GOSlim

1 result

GO Term Annotation Origin Type
protein binding InterProScan molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 1.6E-8