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GENE CARD

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  1. Gene 'Phfumi.CG.MTP2014.S3...' > 

Gene Card

Best human hits

RPL10; RPL10L

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002631

Gene Model ID

KH2012:KH.C12.107

Location

KhC12:4955079..4957047

Transcript Models and Sequences

  KH2012:KH.C12.107.v1.A.nonSL10-1
KH2012:KH.C12.107.v1.A.nonSL1-1
KH2012:KH.C12.107.v1.A.nonSL11-1
KH2012:KH.C12.107.v1.A.nonSL13-1
KH2012:KH.C12.107.v1.A.nonSL14-1
KH2012:KH.C12.107.v1.A.nonSL16-1
KH2012:KH.C12.107.v1.A.nonSL18-1
KH2012:KH.C12.107.v1.A.nonSL19-1
KH2012:KH.C12.107.v1.A.nonSL2-1
KH2012:KH.C12.107.v1.A.nonSL3-1
KH2012:KH.C12.107.v1.A.nonSL4-1
KH2012:KH.C12.107.v1.A.nonSL5-1
KH2012:KH.C12.107.v1.A.nonSL6-1
KH2012:KH.C12.107.v1.A.nonSL7-1
KH2012:KH.C12.107.v1.A.nonSL8-1
KH2012:KH.C12.107.v1.A.nonSL9-1
KH2012:KH.C12.107.v1.A.SL12-1
KH2012:KH.C12.107.v1.A.SL15-1
KH2012:KH.C12.107.v1.A.SL17-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

2 results

cima81386

Plate: VES56_L06

cima861183

Plate: VES64_L20

Gene collection 1 (N. Satoh)

2 results

cieg003n24

Plate: R1CiGC15n16

ciad004d24

Plate: R1CiGC01g10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Ribosomal_L10e PANTHER Ribosomal protein L10e
Ribosomal_L10e PIRSF Ribosomal protein L10e
Ribosomal_L10e/L16_sf Gene3D Ribosomal protein L10e/L16 superfamily
Ribosomal_L10e/L16_sf SUPERFAMILY Ribosomal protein L10e/L16 superfamily
Ribosomal_L10e/L16 Pfam Ribosomal protein L10e/L16
Ribosomal_L10e/L16 CDD Ribosomal protein L10e/L16

GOSlim

12 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
structural constituent of ribosome Blast molecular function
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
endoplasmic reticulum Blast cellular component
cytosol Blast cellular component
ribosome Blast cellular component
membrane Blast cellular component
macromolecular complex Blast cellular component
intracellular organelle part Blast cellular component
regulation of gene expression Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA binding Hs molecular function 257 2.62e-88
structural constituent of ribosome Hs molecular function 257 2.62e-88
protein binding Hs molecular function 257 2.62e-88
intracellular Hs cellular component 257 2.62e-88
nucleus Hs cellular component 257 2.62e-88
endoplasmic reticulum Hs cellular component 257 2.62e-88
smooth endoplasmic reticulum Hs cellular component 257 2.62e-88
cytosol Hs cellular component 257 2.62e-88
ribosome Hs cellular component 257 2.62e-88
polysome Hs cellular component 250 1.04e-85
membrane Hs cellular component 257 2.62e-88
cytosolic large ribosomal subunit Hs cellular component 257 2.62e-88
intracellular ribonucleoprotein complex Hs cellular component 257 2.62e-88
macromolecular complex Hs cellular component 257 2.62e-88
translation regulator activity Hs molecular function 257 2.62e-88

GO (InterProScan)

4 results

GO Term Analysis Type e-value
structural constituent of ribosome PANTHER molecular function 5.0E-87
intracellular PANTHER cellular component 5.0E-87
ribosome PANTHER cellular component 5.0E-87
translation PANTHER biological process 5.0E-87

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