Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000003855
NCBI Reference Sequence	XM_002129385.2
NCBI Reference Sequence	XM_004226692.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl015i02

Plate: R1CiGC10m19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
UBQ-conjugating_enzyme/RWD	Gene3D	Ubiquitin-conjugating enzyme/RWD-like
UBQ-conjugating_enzyme/RWD	SUPERFAMILY	Ubiquitin-conjugating enzyme/RWD-like
UBQ-conjugat_E2	CDD	Ubiquitin-conjugating enzyme E2
UBQ-conjugating_AS	ProSitePatterns	Ubiquitin-conjugating enzyme, active site
UBQ-conjugat_E2	Pfam	Ubiquitin-conjugating enzyme E2
UBQ-conjugat_E2	ProSiteProfiles	Ubiquitin-conjugating enzyme E2

GOSlim

32 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
nucleotide binding	Orthology	molecular function
protein polyubiquitination	Orthology	biological process
ubiquitin-protein transferase activity	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
cellular protein modification process	Orthology	biological process
protein ubiquitination	Orthology	biological process
transferase activity	Orthology	molecular function
macromolecular complex	Orthology	cellular component
extracellular exosome	Orthology	cellular component
endosome	Orthology	cellular component
plasma membrane	Orthology	cellular component
DNA repair	Orthology	biological process
apoptotic process	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
membrane	Orthology	cellular component
intracellular part	Orthology	cellular component
signal transduction	Orthology	biological process
innate immune response	Orthology	biological process
proteolysis	Orthology	biological process
peptidase activity, acting on L-amino acid peptides	Orthology	molecular function
cell surface receptor signaling pathway	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
cellular response to organic substance	Orthology	biological process
immune response	Orthology	biological process
intracellular organelle part	Orthology	cellular component
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component

GO (Orthology)

40 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
ubiquitin ligase complex	Hs	cellular component
nucleotide binding	Hs	molecular function
protein polyubiquitination	Hs	biological process
MyD88-independent toll-like receptor signaling pathway	Hs	biological process
ubiquitin-protein transferase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cellular protein modification process	Hs	biological process
ubiquitin-dependent protein catabolic process	Hs	biological process
protein ubiquitination	Hs	biological process
protein deubiquitination	Hs	biological process
transferase activity	Hs	molecular function
BMP signaling pathway	Hs	biological process
anaphase-promoting complex-dependent catabolic process	Hs	biological process
positive regulation of protein ubiquitination	Hs	biological process
macromolecular complex	Hs	cellular component
TRIF-dependent toll-like receptor signaling pathway	Hs	biological process
Fc-epsilon receptor signaling pathway	Hs	biological process
proteasome-mediated ubiquitin-dependent protein catabolic process	Hs	biological process
T cell receptor signaling pathway	Hs	biological process
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	Hs	biological process
protein autoubiquitination	Hs	biological process
ubiquitin conjugating enzyme activity	Hs	molecular function
extracellular exosome	Hs	cellular component
protein K63-linked ubiquitination	Hs	biological process
protein K48-linked ubiquitination	Hs	biological process
protein K11-linked ubiquitination	Hs	biological process
positive regulation of protein polyubiquitination	Hs	biological process
endosome	Hs	cellular component
plasma membrane	Hs	cellular component
DNA repair	Hs	biological process
protein monoubiquitination	Hs	biological process
apoptotic process	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
endosome membrane	Hs	cellular component
membrane	Hs	cellular component

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin ligase complex	Hs	cellular component	255	3.73e-89
nucleotide binding	Hs	molecular function	255	3.73e-89
ubiquitin-protein transferase activity	Hs	molecular function	255	3.73e-89
protein binding	Hs	molecular function	255	3.73e-89
ATP binding	Hs	molecular function	255	3.73e-89
nucleoplasm	Hs	cellular component	255	3.73e-89
cytoplasm	Hs	cellular component	248	4.56e-86
cytosol	Hs	cellular component	255	3.73e-89
transferase activity	Hs	molecular function	255	3.73e-89
macromolecular complex	Hs	cellular component	255	3.73e-89
ubiquitin conjugating enzyme activity	Hs	molecular function	255	3.73e-89
extracellular exosome	Hs	cellular component	255	3.73e-89

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences