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Gene Card

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002662

Gene Model ID

KH2012:KH.C12.136

Location

KhC12:1052434..1056703

Transcript Models and Sequences

  KH2012:KH.C12.136.v1.A.SL1-1
KH2012:KH.C12.136.v1.A.SL3-1
KH2012:KH.C12.136.v1.A.SL5-1
KH2012:KH.C12.136.v2.A.SL2-1
KH2012:KH.C12.136.v2.A.SL4-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000000704
NCBI Reference Sequence XM_002122352.4
NCBI Reference Sequence XM_004226670.3
Collections

Gateway full ORF

4 results

cima822659

Plate: VES60_L10

cima859599

Plate: VES64_C13

cima862124

Plate: VES64_L23

cima885343

Plate: VES69_E19

Gene collection 1 (N. Satoh)

2 results

ciad042b13

Plate: R1CiGC04h15

cicl091i13

Plate: R1CiGC39d17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

No result

IPR Term Analysis Definition

GOSlim

21 results

GO Term Annotation Origin Type
extracellular region Orthology cellular component
plasma membrane Orthology cellular component
membrane Orthology cellular component
integral component of membrane Orthology cellular component
macromolecular complex Orthology cellular component
identical protein binding Orthology molecular function
cell projection Orthology cellular component
protein homooligomerization Orthology biological process
membrane organization Orthology biological process
organelle organization Orthology biological process
cellular protein modification process Orthology biological process
plasma membrane part Orthology cellular component
cell surface Orthology cellular component
plasma membrane region Orthology cellular component
cytoskeletal part Orthology cellular component
whole membrane Orthology cellular component
intracellular organelle part Orthology cellular component
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component
bounding membrane of organelle Orthology cellular component
intrinsic component of membrane Orthology cellular component

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
platelet degranulation Hs biological process
extracellular region Hs cellular component
plasma membrane Hs cellular component
C-terminal protein lipidation Hs biological process
external side of plasma membrane Hs cellular component
membrane Hs cellular component
integral component of membrane Hs cellular component
filopodium Hs cellular component
platelet alpha granule membrane Hs cellular component
anchored component of membrane Hs cellular component
macromolecular complex Hs cellular component
identical protein binding Hs molecular function
cell projection Hs cellular component
protein homooligomerization Hs biological process

GO (Blast)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value

GO (InterProScan)

No result

GO Term Analysis Type e-value

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