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GENE CARD

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Gene Card

Best human hits

ZNF30; ZNF490; ZNF540

Unique Gene ID

Cirobu.g00002727

Gene Model ID

KH2012:KH.C12.196

Location

KhC12:2406430..2411801

Collections

Gateway full ORF

2 results

cien32550

Plate: VES75_L11

cien92762

Plate: VES84_G19

Gene collection 1 (N. Satoh)

2 results

cieg057m04

Plate: R1CiGC24b24

citb041f23

Plate: R1CiGC33a11

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

13 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
metal ion binding Blast molecular function
negative regulation of gene expression Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
translation repressor activity, nucleic acid binding Hs molecular function 56.2 5.18e-08
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 56.6 3.89e-08
nucleic acid binding Hs molecular function 56.6 3.89e-08
DNA binding Hs molecular function 56.6 3.89e-08
transcription factor activity, sequence-specific DNA binding Hs molecular function 56.6 3.89e-08
protein binding Hs molecular function 56.2 4.06e-08
intracellular Hs cellular component 56.6 3.89e-08
nucleus Hs cellular component 56.6 3.89e-08
nucleoplasm Hs cellular component 56.2 5.18e-08
cytoplasm Hs cellular component 56.2 5.18e-08
cytosol Hs cellular component 56.2 5.18e-08
intracellular membrane-bounded organelle Hs cellular component 56.2 5.18e-08
metal ion binding Hs molecular function 56.6 3.89e-08

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 0.13