Aniseed - Gene card

Gene Card

Best human hits

MAT1A; MAT2A

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002764

Gene Model ID

KH2012:KH.C12.229

Location

KhC12:1799690..1806216

Transcript Models and Sequences

KH2012:KH.C12.229.v1.A.SL1-1
KH2012:KH.C12.229.v1.A.SL2-1
KH2012:KH.C12.229.v1.A.SL3-1

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000008174
NCBI Reference Sequence	XM_002128553.4
NCBI Reference Sequence	XM_009862148.2
NCBI Reference Sequence	XM_018814336.1

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

2 results

ciht027e01

Plate: R1CiGC43f22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
S-AdoMet_synt_C	Pfam	S-adenosylmethionine synthetase, C-terminal
S-AdoMet_synthetase_sfam	SUPERFAMILY	S-adenosylmethionine synthetase superfamily
S-AdoMet_synt_central	Pfam	S-adenosylmethionine synthetase, central domain
S-AdoMet_synt_N	Pfam	S-adenosylmethionine synthetase, N-terminal
S-AdoMet_synthetase	TIGRFAM	S-adenosylmethionine synthetase
S-AdoMet_synthetase	Hamap	S-adenosylmethionine synthetase
S-AdoMet_synthetase	PIRSF	S-adenosylmethionine synthetase
S-AdoMet_synthetase	PANTHER	S-adenosylmethionine synthetase
ADOMET_SYNTHASE_CS	ProSitePatterns	S-adenosylmethionine synthetase, conserved site

GOSlim

14 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
cytosol	Orthology	cellular component
transferase activity	Orthology	molecular function
identical protein binding	Orthology	molecular function
metal ion binding	Orthology	molecular function
cellular biosynthetic process	Orthology	biological process
cellular metabolic process	Orthology	biological process
metabolic process	Orthology	biological process
protein oligomerization	Orthology	biological process
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
protein homooligomerization	Orthology	biological process

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
methionine adenosyltransferase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
cytosol	Hs	cellular component
S-adenosylmethionine biosynthetic process	Hs	biological process
one-carbon metabolic process	Hs	biological process
transferase activity	Hs	molecular function
methylation	Hs	biological process
protein hexamerization	Hs	biological process
identical protein binding	Hs	molecular function
metal ion binding	Hs	molecular function
methionine adenosyltransferase complex	Hs	cellular component
protein homotetramerization	Hs	biological process
protein heterooligomerization	Hs	biological process
selenomethionine adenosyltransferase activity	Hs	molecular function

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
nucleotide binding	Hs	molecular function	603
methionine adenosyltransferase activity	Hs	molecular function	603
protein binding	Hs	molecular function	603
ATP binding	Hs	molecular function	603
cytosol	Hs	cellular component	603
transferase activity	Hs	molecular function	603
identical protein binding	Hs	molecular function	603
metal ion binding	Hs	molecular function	603
methionine adenosyltransferase complex	Hs	cellular component	603
selenomethionine adenosyltransferase activity	Hs	molecular function	596

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
methionine adenosyltransferase activity	PANTHER	molecular function	2.4E-221
ATP binding	PANTHER	molecular function	2.4E-221
S-adenosylmethionine biosynthetic process	PANTHER	biological process	2.4E-221