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Gene Card

Best human hits

CHD7; CHD8; CHD9

Unique Gene ID

Cirobu.g00002818

Gene Model ID

KH2012:KH.C12.278

Location

KhC12:3910328..3941320

Collections

Gateway full ORF

1 result

cien180571

Plate: VES98_K03

Gene collection 1 (N. Satoh)

7 results

cilv006i11

Plate: R1CiGC25o24

cilv039i23

Plate: R1CiGC28a08

citb038m18

Plate: R1CiGC32j15

cits031j22

Plate: R1CiGC34a09

citb044i24

Plate: R1CiGC45l19

cicl062d09

Plate: R1CiGC39a18

citb036p24

Plate: R1CiGC32i24

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

18 results

IPR Term Analysis Definition
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
Chromo-like_dom_sf SUPERFAMILY Chromo-like domain superfamily
SNF2_N Pfam SNF2-related, N-terminal domain
BRK_sf SUPERFAMILY BRK domain superfamily
Chromo_domain Pfam Chromo domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
BRK_sf Gene3D BRK domain superfamily
BRK_domain SMART BRK domain
Chromo/chromo_shadow_dom SMART Chromo/chromo shadow domain
Chromo/chromo_shadow_dom ProSiteProfiles Chromo/chromo shadow domain
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
SNF2-like_sf Gene3D SNF2-like, N-terminal domain superfamily
Helicase_C SMART Helicase, C-terminal
Chromo/chromo_shadow_dom CDD Chromo/chromo shadow domain
BRK_domain Pfam BRK domain
Helicase_C Pfam Helicase, C-terminal
Helicase_C ProSiteProfiles Helicase, C-terminal
Helicase_C CDD Helicase, C-terminal

GOSlim

16 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
DNA binding Blast molecular function
chromatin binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
hydrolase activity Blast molecular function
hydrolase activity, acting on acid anhydrides Blast molecular function
macromolecular complex Blast cellular component
organelle organization Blast biological process
nucleoside-triphosphatase activity Blast molecular function
nucleoplasm part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 1558 0.0
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 1537 0.0
p53 binding Hs molecular function 1547 0.0
DNA binding Hs molecular function 1558 0.0
DNA helicase activity Hs molecular function 1547 0.0
chromatin binding Hs molecular function 1547 0.0
helicase activity Hs molecular function 1558 0.0
protein binding Hs molecular function 1558 0.0
ATP binding Hs molecular function 1558 0.0
nucleus Hs cellular component 1558 0.0
nucleoplasm Hs cellular component 1558 0.0
nucleolus Hs cellular component 1537 0.0
cytoplasm Hs cellular component 1558 0.0
beta-catenin binding Hs molecular function 1547 0.0
DNA-dependent ATPase activity Hs molecular function 1547 0.0
hydrolase activity Hs molecular function 1558 0.0
hydrolase activity, acting on acid anhydrides Hs molecular function 1558 0.0
macromolecular complex Hs cellular component 1547 0.0
methylated histone binding Hs molecular function 1547 0.0
histone binding Hs molecular function 1547 0.0
armadillo repeat domain binding Hs molecular function 1547 0.0
MLL1 complex Hs cellular component 1547 0.0
promoter-specific chromatin binding Hs molecular function 1537 0.0

GO (InterProScan)

3 results

GO Term Analysis Type e-value
protein binding Pfam molecular function 5.0E-13
ATP binding Pfam molecular function 4.2E-60
hydrolase activity, acting on acid anhydrides Pfam molecular function 5.0E-13





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