Gene Card
Best human hits
PSMC1; PSMC4
Unique Gene ID
Cirobu.g00002831
Gene Model ID
KH2012:KH.C12.290
Location
KhC12:3230310..3234863
Transcript Models and Sequences
External database links
1 result
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000003873 |
Gateway full ORF
2 results
cien137152
Plate: VES91_O19
cien163814
Plate: VES95_D16
Gene collection 1 (N. Satoh)
1 result
cicl025a20
Plate: R1CiGC11d19
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| ATPase_AAA_CS | ProSitePatterns | ATPase, AAA-type, conserved site |
| 26S_Psome_P45-like | TIGRFAM | 26S proteasome regulatory subunit P45-like |
| AAA+_ATPase | SMART | AAA+ ATPase domain |
| P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
| ATPase_AAA_core | Pfam | ATPase, AAA-type, core |
| PSMC4 | PANTHER | 26S Proteasome regulatory subunit 6B |
GOSlim
18 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleotide binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| ATP binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| cytosol | Blast | cellular component |
| proteolysis | Blast | biological process |
| membrane | Blast | cellular component |
| hydrolase activity | Blast | molecular function |
| synapse | Blast | cellular component |
| intracellular part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| nucleoside-triphosphatase activity | Blast | molecular function |
| transcription factor binding | Blast | molecular function |
| nuclear lumen | Blast | cellular component |
| protein metabolic process | InterProScan | biological process |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
21 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 738 | 0.0 |
| proteasome complex | Hs | cellular component | 738 | 0.0 |
| RNA binding | Hs | molecular function | 404 | 9.04e-139 |
| protein binding | Hs | molecular function | 738 | 0.0 |
| ATP binding | Hs | molecular function | 738 | 0.0 |
| nucleus | Hs | cellular component | 738 | 0.0 |
| nucleoplasm | Hs | cellular component | 738 | 0.0 |
| cytoplasm | Hs | cellular component | 738 | 0.0 |
| cytosol | Hs | cellular component | 738 | 0.0 |
| proteasome regulatory particle | Hs | cellular component | 404 | 9.04e-139 |
| proteasome regulatory particle, base subcomplex | Hs | cellular component | 738 | 0.0 |
| membrane | Hs | cellular component | 738 | 0.0 |
| inclusion body | Hs | cellular component | 738 | 0.0 |
| hydrolase activity | Hs | molecular function | 738 | 0.0 |
| ATPase activity | Hs | molecular function | 738 | 0.0 |
| TBP-class protein binding | Hs | molecular function | 738 | 0.0 |
| proteasome accessory complex | Hs | cellular component | 738 | 0.0 |
| nuclear proteasome complex | Hs | cellular component | 738 | 0.0 |
| cytosolic proteasome complex | Hs | cellular component | 738 | 0.0 |
| proteasome-activating ATPase activity | Hs | molecular function | 738 | 0.0 |
| synapse | Hs | cellular component | 738 | 0.0 |
GO (InterProScan)
5 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| ATP binding | Pfam | molecular function | 4.5E-43 |
| cytoplasm | TIGRFAM | cellular component | 8.3E-135 |
| hydrolase activity | TIGRFAM | molecular function | 8.3E-135 |
| protein catabolic process | TIGRFAM | biological process | 8.3E-135 |
| proteasome-activating ATPase activity | PANTHER | molecular function | 2.6E-236 |
