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GENE CARD

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Gene Card

Best human hits

CETN1; CETN2; CETN3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002921

Gene Model ID

KH2012:KH.C12.371

Location

KhC12:4669299..4670096

Transcript Models and Sequences

  KH2012:KH.C12.371.v1.A.SL2-1
KH2012:KH.C12.371.v1.A.SL3-1
KH2012:KH.C12.371.v1.R.ND1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000023332
Collections

Gateway full ORF

2 results

cima875191

Plate: VES67_K16

cien133560

Plate: VES91_J05

Gene collection 1 (N. Satoh)

1 result

cicl050a03

Plate: R1CiGC13f08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
EF_hand_dom ProSiteProfiles EF-hand domain
EF_hand_dom Pfam EF-hand domain
EF_hand_dom CDD EF-hand domain
EF_hand_dom SMART EF-hand domain
EF_Hand_1_Ca_BS ProSitePatterns EF-Hand 1, calcium-binding site
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair

GOSlim

29 results

GO Term Annotation Origin Type
calcium ion binding Orthology molecular function
protein binding Orthology molecular function
intracellular Blast cellular component
nucleus Orthology cellular component
nucleoplasm Blast cellular component
nucleolus Orthology cellular component
cytoplasm Orthology cellular component
centrosome Orthology cellular component
microtubule organizing center Orthology cellular component
cytosol Blast cellular component
cytoskeleton Orthology cellular component
cell cycle Orthology biological process
microtubule binding Orthology molecular function
metal ion binding Orthology molecular function
cell division Orthology biological process
cytoplasmic part Orthology cellular component
microtubule-based process Orthology biological process
organelle organization Orthology biological process
macromolecular complex binding Orthology molecular function
organelle part Orthology cellular component
cell projection part Orthology cellular component
neuron projection Orthology cellular component
macromolecular complex Orthology cellular component
plasma membrane region Orthology cellular component
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component
organelle Blast cellular component
cell projection Blast cellular component
nuclear part Blast cellular component

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
calcium ion binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
centrosome Hs cellular component
centriole Hs cellular component
microtubule organizing center Hs cellular component
cytoskeleton Hs cellular component
cell cycle Hs biological process
centrosome cycle Hs biological process
microtubule binding Hs molecular function
G-protein beta/gamma-subunit complex binding Hs molecular function
photoreceptor connecting cilium Hs cellular component
ciliary transition zone Hs cellular component
ciliary basal body Hs cellular component
metal ion binding Hs molecular function
cell division Hs biological process

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
spindle pole Hs cellular component 169 2.42e-54
calcium ion binding Hs molecular function 252 5.96e-87
protein binding Hs molecular function 252 5.96e-87
intracellular Hs cellular component 169 3.96e-54
nucleus Hs cellular component 252 5.96e-87
nucleoplasm Hs cellular component 169 3.96e-54
nucleolus Hs cellular component 252 5.96e-87
cytoplasm Hs cellular component 252 5.96e-87
centrosome Hs cellular component 252 5.96e-87
centriole Hs cellular component 252 5.96e-87
microtubule organizing center Hs cellular component 252 5.96e-87
cytosol Hs cellular component 169 3.96e-54
cytoskeleton Hs cellular component 252 5.96e-87
cilium Hs cellular component 169 3.96e-54
microtubule binding Hs molecular function 252 5.96e-87
G-protein beta/gamma-subunit complex binding Hs molecular function 252 5.96e-87
photoreceptor connecting cilium Hs cellular component 252 5.96e-87
heterotrimeric G-protein binding Hs molecular function 169 2.42e-54
ciliary transition zone Hs cellular component 252 5.96e-87
ciliary basal body Hs cellular component 252 5.96e-87
metal ion binding Hs molecular function 252 5.96e-87
XPC complex Hs cellular component 169 3.96e-54

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding CDD molecular function 3.88745E-17

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