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GENE CARD

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Gene Card

Best human hits

TXLNA; TXLNB; TXLNG

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00002938

Gene Model ID

KH2012:KH.C12.387

Location

KhC12:2010354..2019516

Transcript Models and Sequences

  KH2012:KH.C12.387.v1.A.SL1-1
KH2012:KH.C12.387.v2.A.SL2-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000014285
NCBI Reference Sequence XM_002130728.2
NCBI Reference Sequence XM_018814326.1
Collections

Gateway full ORF

2 results

cien101248

Plate: VES86_N02

cien102975

Plate: VES86_E11

Gene collection 1 (N. Satoh)

2 results

cieg032o10

Plate: R1CiGC20l08

cieg042k18

Plate: R1CiGC22i04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Taxilin_fam PANTHER Taxilin family
Taxilin_fam Pfam Taxilin family

GOSlim

23 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
extracellular region Orthology cellular component
nucleus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
cell cycle Orthology biological process
cell proliferation Orthology biological process
membrane Orthology cellular component
cytokine-mediated signaling pathway Orthology biological process
nuclear membrane Orthology cellular component
protein heterodimerization activity Orthology molecular function
receptor binding Orthology molecular function
molecular function regulator Orthology molecular function
regulation of signal transduction Orthology biological process
signaling receptor activity Orthology molecular function
membrane organization Orthology biological process
organelle organization Orthology biological process
regulation of molecular function Orthology biological process
animal organ development Orthology biological process
cellular process Orthology biological process
immune system process Orthology biological process

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
cytokine activity Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
exocytosis Hs biological process
cell cycle Hs biological process
cell proliferation Hs biological process
regulation of receptor activity Hs biological process
regulation of cell cycle process Hs biological process
membrane Hs cellular component
cytokine-mediated signaling pathway Hs biological process
syntaxin binding Hs molecular function
high molecular weight B cell growth factor receptor binding Hs molecular function
regulation of bone mineralization Hs biological process
nuclear membrane Hs cellular component
B cell activation Hs biological process
protein heterodimerization activity Hs molecular function
regulation of cell cycle Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
cytokine activity Hs molecular function 230 1.15e-67
protein binding Hs molecular function 230 1.15e-67
extracellular region Hs cellular component 230 1.15e-67
nucleus Hs cellular component 228 2.49e-67
cytoplasm Hs cellular component 230 1.15e-67
cytosol Hs cellular component 230 1.15e-67
membrane Hs cellular component 230 1.15e-67
syntaxin binding Hs molecular function 230 1.15e-67
high molecular weight B cell growth factor receptor binding Hs molecular function 230 1.15e-67
nuclear membrane Hs cellular component 228 2.49e-67
protein heterodimerization activity Hs molecular function 228 2.49e-67

GO (InterProScan)

1 result

GO Term Analysis Type e-value
syntaxin binding PANTHER molecular function 2.7E-98

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