Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000001362

Collections

Gateway full ORF

1 result

Gene collection 1 (N. Satoh)

2 results

cign003c03

Plate: R1CiGC41d06

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term	Analysis	Definition
Helicase_ATP-bd	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
SNF2-like_sf	Gene3D	SNF2-like, N-terminal domain superfamily
Helicase_C	ProSiteProfiles	Helicase, C-terminal
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain
ARM-type_fold	SUPERFAMILY	Armadillo-type fold
Helicase_C	Pfam	Helicase, C-terminal
Helicase_C	SMART	Helicase, C-terminal
ARM-like	Gene3D	Armadillo-like helical
Helicase_C	CDD	Helicase, C-terminal
SNF2_N	Pfam	SNF2-related, N-terminal domain
DUF3535	Pfam	Domain of unknown function DUF3535

GOSlim

31 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcription coactivator activity	Blast	molecular function
binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Blast	cellular component
protein C-terminus binding	Blast	molecular function
nuclear body	Blast	cellular component
hydrolase activity	Orthology	molecular function
hydrolase activity, acting on acid anhydrides	Blast	molecular function
intracellular membrane-bounded organelle	Orthology	cellular component
transcription regulatory region DNA binding	Blast	molecular function
macromolecular complex binding	Blast	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
protein N-terminus binding	Blast	molecular function
nucleoside-triphosphatase activity	Orthology	molecular function
regulation of molecular function	Orthology	biological process
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear lumen	Blast	cellular component
nucleoplasm part	Blast	cellular component
macromolecular complex	Blast	cellular component
enzyme activator activity	Blast	molecular function
protein kinase binding	Blast	molecular function
protein kinase activity	Blast	molecular function
cytoskeleton	Blast	cellular component
neuron part	Blast	cellular component

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
helicase activity	Hs	molecular function
binding	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
hydrolase activity	Hs	molecular function
negative regulation of chromatin binding	Hs	biological process
intracellular membrane-bounded organelle	Hs	cellular component
negative regulation of transcription, DNA-templated	Hs	biological process

GO (Blast)

31 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	1415	0.0
nuclear chromatin	Hs	cellular component	280	4.97e-76
RNA polymerase II transcription coactivator activity	Hs	molecular function	280	4.97e-76
DNA binding	Hs	molecular function	1415	0.0
chromatin binding	Hs	molecular function	290	2.25e-79
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	1415	0.0
transcription coactivator activity	Hs	molecular function	280	4.97e-76
helicase activity	Hs	molecular function	1415	0.0
binding	Hs	molecular function	1415	0.0
protein binding	Hs	molecular function	1415	0.0
ATP binding	Hs	molecular function	1415	0.0
nucleus	Hs	cellular component	1415	0.0
nucleoplasm	Hs	cellular component	1415	0.0
nucleolus	Hs	cellular component	290	2.25e-79
protein C-terminus binding	Hs	molecular function	290	2.25e-79
transcription elongation factor complex	Hs	cellular component	290	2.25e-79
DNA-dependent ATPase activity	Hs	molecular function	290	2.25e-79
SWI/SNF complex	Hs	cellular component	280	4.97e-76
nuclear body	Hs	cellular component	290	2.25e-79
hydrolase activity	Hs	molecular function	1415	0.0
hydrolase activity, acting on acid anhydrides	Hs	molecular function	280	4.97e-76
ATPase activity	Hs	molecular function	280	4.97e-76
protein tyrosine kinase activator activity	Hs	molecular function	290	2.25e-79
histone binding	Hs	molecular function	280	4.97e-76
intracellular membrane-bounded organelle	Hs	cellular component	1415	0.0
transcription regulatory region DNA binding	Hs	molecular function	280	4.97e-76
macromolecular complex binding	Hs	molecular function	290	2.25e-79
intermediate filament cytoskeleton	Hs	cellular component	280	4.97e-76
protein N-terminus binding	Hs	molecular function	290	2.25e-79
npBAF complex	Hs	cellular component	280	4.97e-76
nBAF complex	Hs	cellular component	280	4.97e-76

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
binding	SUPERFAMILY	molecular function	8.51E-53
ATP binding	Pfam	molecular function	1.9E-59

Gene Card

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Unique Gene ID

Gene Model ID

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Transcript Models and Sequences