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Gene Card

Best human hits

NOG

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003129

Gene Model ID

KH2012:KH.C12.562

Location

KhC12:3549166..3551474

Transcript Models and Sequences

  KH2012:KH.C12.562.v1.C.SL1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000001156
NCBI Reference Sequence NM_001078309.1
Collections

Gateway full ORF

2 results

cien71344

Plate: VES81_A13

cien177812

Plate: VES97_B19

Gene collection 1 (N. Satoh)

2 results

cicl061d20

Plate: R1CiGC15g10

cilv027l15

Plate: R1CiGC27k22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Noggin PIRSF Noggin
Cystine-knot_cytokine SUPERFAMILY Cystine-knot cytokine
Noggin PANTHER Noggin
Cystine-knot_cytokine Gene3D Cystine-knot cytokine

GOSlim

34 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
protein binding Orthology molecular function
extracellular region Orthology cellular component
extracellular space Orthology cellular component
multicellular organism development Orthology biological process
nervous system development Orthology biological process
axon guidance Orthology biological process
central nervous system development Orthology biological process
brain development Orthology biological process
positive regulation of gene expression Orthology biological process
negative regulation of gene expression Orthology biological process
cell differentiation Orthology biological process
wound healing Orthology biological process
protein homodimerization activity Orthology molecular function
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
anatomical structure formation involved in morphogenesis Orthology biological process
negative regulation of canonical Wnt signaling pathway Orthology biological process
system development Orthology biological process
animal organ development Orthology biological process
anatomical structure morphogenesis Orthology biological process
heart development Orthology biological process
anatomical structure development Orthology biological process
cell migration Orthology biological process
cell surface receptor signaling pathway Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
cellular response to organic substance Orthology biological process
regulation of signal transduction Orthology biological process
negative regulation of signal transduction Orthology biological process
developmental process Orthology biological process
positive regulation of cell proliferation Orthology biological process
head development Orthology biological process
protein phosphorylation Orthology biological process
blood vessel morphogenesis Orthology biological process
negative regulation of apoptotic process Orthology biological process

GO (Orthology)

57 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
skeletal system development Hs biological process
osteoblast differentiation Hs biological process
urogenital system development Hs biological process
ureteric bud development Hs biological process
endoderm formation Hs biological process
mesoderm formation Hs biological process
epithelial to mesenchymal transition Hs biological process
neural plate morphogenesis Hs biological process
neural tube closure Hs biological process
outflow tract morphogenesis Hs biological process
endocardial cushion morphogenesis Hs biological process
protein binding Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
multicellular organism development Hs biological process
pattern specification process Hs biological process
nervous system development Hs biological process
axon guidance Hs biological process
central nervous system development Hs biological process
brain development Hs biological process
endoderm development Hs biological process
motor neuron axon guidance Hs biological process
dorsal/ventral pattern formation Hs biological process
positive regulation of gene expression Hs biological process
negative regulation of gene expression Hs biological process
cytokine binding Hs molecular function
spinal cord development Hs biological process
neural tube development Hs biological process
pituitary gland development Hs biological process
cell differentiation Hs biological process
negative regulation of cell migration Hs biological process
BMP signaling pathway Hs biological process
regulation of BMP signaling pathway Hs biological process
negative regulation of BMP signaling pathway Hs biological process
somatic stem cell population maintenance Hs biological process
wound healing Hs biological process
protein homodimerization activity Hs molecular function
negative regulation of cell differentiation Hs biological process
negative regulation of osteoblast differentiation Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
axial mesoderm development Hs biological process
notochord morphogenesis Hs biological process
anatomical structure formation involved in morphogenesis Hs biological process
embryonic skeletal system development Hs biological process
positive regulation of epithelial cell proliferation Hs biological process
cartilage development Hs biological process
limb development Hs biological process
embryonic skeletal joint morphogenesis Hs biological process
face morphogenesis Hs biological process
negative regulation of pathway-restricted SMAD protein phosphorylation Hs biological process
somite development Hs biological process
BMP signaling pathway involved in heart development Hs biological process
pharyngeal arch artery morphogenesis Hs biological process
negative regulation of canonical Wnt signaling pathway Hs biological process
positive regulation of branching involved in ureteric bud morphogenesis Hs biological process
negative regulation of apoptotic signaling pathway Hs biological process

GO (Blast)

5 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein binding Hs molecular function 156 8.50e-48
extracellular region Hs cellular component 156 8.50e-48
extracellular space Hs cellular component 156 8.50e-48
cytokine binding Hs molecular function 156 8.50e-48
protein homodimerization activity Hs molecular function 156 8.50e-48

GO (InterProScan)

2 results

GO Term Analysis Type e-value
negative regulation of BMP signaling pathway PANTHER biological process 1.3E-72
negative regulation of cell differentiation PANTHER biological process 1.3E-72

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