Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

CSMD1; CSMD2; MASP1

Unique Gene ID

Cirobu.g00003248

Gene Model ID

KH2012:KH.C12.670

Location

KhC12:3770754..3776049

External Database Gene Card

External database links

2 results

Collections

Gene collection 1 (N. Satoh)

1 result

cits049m13

Plate: R1CiGC35p14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions
Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Ricin_B_lectin ProSiteProfiles Ricin B, lectin domain
Ricin_B_lectin CDD Ricin B, lectin domain
CUB_dom ProSiteProfiles CUB domain
Sperma_CUB_dom_sf SUPERFAMILY Spermadhesin, CUB domain superfamily
Sperma_CUB_dom_sf Gene3D Spermadhesin, CUB domain superfamily
Ricin_B-like_lectins SUPERFAMILY Ricin B-like lectins
Sushi/SCR/CCP_sf SUPERFAMILY Sushi/SCR/CCP superfamily
CUB_dom Pfam CUB domain
CUB_dom SMART CUB domain
CUB_dom CDD CUB domain

GOSlim

15 results

GO Term Annotation Origin Type
serine-type endopeptidase activity Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
nucleoplasm Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
peptidase activity Blast molecular function
serine-type peptidase activity Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
hydrolase activity Blast molecular function
protein homodimerization activity Blast molecular function
metal ion binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
serine-type endopeptidase activity Hs molecular function 73.9 1.47e-13
calcium ion binding Hs molecular function 73.9 1.47e-13
protein binding Hs molecular function 73.9 1.47e-13
extracellular region Hs cellular component 73.9 1.47e-13
extracellular space Hs cellular component 73.9 1.47e-13
nucleoplasm Hs cellular component 73.9 1.47e-13
cytosol Hs cellular component 73.9 1.47e-13
plasma membrane Hs cellular component 79.3 4.46e-15
peptidase activity Hs molecular function 73.9 1.47e-13
serine-type peptidase activity Hs molecular function 73.9 1.47e-13
membrane Hs cellular component 79.3 4.46e-15
integral component of membrane Hs cellular component 79.3 4.46e-15
hydrolase activity Hs molecular function 73.9 1.47e-13
protein homodimerization activity Hs molecular function 73.9 1.47e-13
metal ion binding Hs molecular function 73.9 1.47e-13
calcium-dependent protein binding Hs molecular function 73.9 1.47e-13

GO (InterProScan)

No result

GO Term Analysis Type e-value