Aniseed - Gene card

Gene Card

Best human hits

FLNA; FLNB; FLNC

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003249

Gene Model ID

KH2012:KH.C12.671

Location

KhC12:3447852..3506040

Transcript Models and Sequences

KH2012:KH.C12.671.v1.A.nonSL3-1
KH2012:KH.C12.671.v1.A.SL1-1
KH2012:KH.C12.671.v2.A.SL2-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000022213

Collections

Gateway full ORF

1 result

Gene collection 1 (N. Satoh)

2 results

cilv074e12

Plate: R1CiGC44f03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term	Analysis	Definition
Filamin/ABP280_repeat-like	ProSiteProfiles	Filamin/ABP280 repeat-like
Ig_E-set	SUPERFAMILY	Immunoglobulin E-set
Ig-like_fold	Gene3D	Immunoglobulin-like fold
CH-domain	ProSiteProfiles	Calponin homology domain
FLN_C	PANTHER	Filamin C
Actinin_actin-bd_CS	ProSitePatterns	Actinin-type actin-binding domain, conserved site
CH-domain	SMART	Calponin homology domain
CH-domain	Pfam	Calponin homology domain
CH_dom_sf	SUPERFAMILY	CH domain superfamily
CH_dom_sf	Gene3D	CH domain superfamily
Filamin/ABP280_rpt	SMART	Filamin/ABP280 repeat
Filamin/ABP280_repeat-like	Pfam	Filamin/ABP280 repeat-like
CH-domain	CDD	Calponin homology domain

GOSlim

77 results

GO Term	Annotation Origin	Type
RNA binding	Orthology	molecular function
actin binding	Orthology	molecular function
signal transducer activity	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
nucleus	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
plasma membrane	Orthology	cellular component
brush border	Orthology	cellular component
focal adhesion	Orthology	cellular component
signal transduction	Orthology	biological process
multicellular organism development	Orthology	biological process
cytoskeletal protein binding	Orthology	molecular function
transcription factor binding	Orthology	molecular function
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
kinase binding	Orthology	molecular function
cell projection organization	Orthology	biological process
cell differentiation	Orthology	biological process
identical protein binding	Orthology	molecular function
protein homodimerization activity	Orthology	molecular function
neuronal cell body	Orthology	cellular component
negative regulation of apoptotic process	Orthology	biological process
establishment of protein localization	Orthology	biological process
perinuclear region of cytoplasm	Orthology	cellular component
actin filament binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
receptor binding	Orthology	molecular function
cytoskeletal part	Orthology	cellular component
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
cell development	Orthology	biological process
animal organ development	Orthology	biological process
cell morphogenesis involved in differentiation	Orthology	biological process
cell junction	Orthology	cellular component
cell periphery	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
cell	Orthology	cellular component
cellular protein localization	Orthology	biological process
regulation of catalytic activity	Orthology	biological process
intracellular signal transduction	Orthology	biological process
G-protein coupled receptor signaling pathway	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
metal ion transport	Orthology	biological process
molecular function regulator	Orthology	molecular function
transmembrane transport	Orthology	biological process
monovalent inorganic cation transport	Orthology	biological process
enzyme binding	Orthology	molecular function
cell migration	Orthology	biological process
brain development	Orthology	biological process
organelle part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
blood coagulation	Orthology	biological process
cellular process	Orthology	biological process
intracellular organelle part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
macromolecular complex binding	Orthology	molecular function
protein metabolic process	Orthology	biological process
mRNA metabolic process	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
protein localization to membrane	Orthology	biological process
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
positive regulation of signal transduction	Orthology	biological process
regulation of molecular function	Orthology	biological process
wound healing	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
cell adhesion molecule binding	Orthology	molecular function
cytoplasmic vesicle	Orthology	cellular component
cell adhesion	Orthology	biological process
innate immune response	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
microtubule-based process	Orthology	biological process
positive regulation of cell proliferation	Orthology	biological process
generation of neurons	Orthology	biological process

GO (Orthology)

92 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G-protein coupled receptor binding	Hs	molecular function
stress fiber	Hs	cellular component
platelet degranulation	Hs	biological process
keratinocyte development	Hs	biological process
epithelial cell morphogenesis	Hs	biological process
RNA binding	Hs	molecular function
actin binding	Hs	molecular function
signal transducer activity	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
nucleus	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
actin filament	Hs	cellular component
plasma membrane	Hs	cellular component
brush border	Hs	cellular component
cell-cell junction	Hs	cellular component
focal adhesion	Hs	cellular component
cell cortex	Hs	cellular component
cytoskeletal anchoring at plasma membrane	Hs	biological process
signal transduction	Hs	biological process
adenylate cyclase-inhibiting dopamine receptor signaling pathway	Hs	biological process
multicellular organism development	Hs	biological process
muscle organ development	Hs	biological process
skeletal muscle tissue development	Hs	biological process
cytoskeletal protein binding	Hs	molecular function
transcription factor binding	Hs	molecular function
potassium channel regulator activity	Hs	molecular function
actin cytoskeleton	Hs	cellular component
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
sarcoplasm	Hs	cellular component
Rho GTPase binding	Hs	molecular function
Ral GTPase binding	Hs	molecular function
kinase binding	Hs	molecular function
formation of radial glial scaffolds	Hs	biological process
cerebral cortex development	Hs	biological process
Z disc	Hs	cellular component
cell projection organization	Hs	biological process
actin cytoskeleton organization	Hs	biological process
cell differentiation	Hs	biological process
platelet activation	Hs	biological process
regulation of cell migration	Hs	biological process
ankyrin binding	Hs	molecular function
cortical cytoskeleton	Hs	cellular component
small GTPase binding	Hs	molecular function
Myb complex	Hs	cellular component
actin cytoskeleton reorganization	Hs	biological process
mu-type opioid receptor binding	Hs	molecular function
filamentous actin	Hs	cellular component
protein localization to cell surface	Hs	biological process
Fc-gamma receptor I complex binding	Hs	molecular function
negative regulation of protein catabolic process	Hs	biological process
sarcolemma	Hs	cellular component
mRNA transcription from RNA polymerase II promoter	Hs	biological process
identical protein binding	Hs	molecular function
protein homodimerization activity	Hs	molecular function
positive regulation of transcription factor import into nucleus	Hs	biological process
neuronal cell body	Hs	cellular component
costamere	Hs	cellular component
negative regulation of apoptotic process	Hs	biological process
receptor clustering	Hs	biological process
positive regulation of I-kappaB kinase/NF-kappaB signaling	Hs	biological process
dendritic shaft	Hs	cellular component
negative regulation of sequence-specific DNA binding transcription factor activity	Hs	biological process
wound healing, spreading of cells	Hs	biological process
ion channel binding	Hs	molecular function
establishment of protein localization	Hs	biological process
cadherin binding	Hs	molecular function
phagocytic vesicle	Hs	cellular component
SMAD binding	Hs	molecular function
Rac GTPase binding	Hs	molecular function
perinuclear region of cytoplasm	Hs	cellular component
muscle fiber development	Hs	biological process
protein stabilization	Hs	biological process
actin filament binding	Hs	molecular function
GTPase binding	Hs	molecular function
actin crosslink formation	Hs	biological process
cilium assembly	Hs	biological process
extracellular exosome	Hs	cellular component
platelet aggregation	Hs	biological process
cellular response to interferon-gamma	Hs	biological process
semaphorin-plexin signaling pathway	Hs	biological process
protein localization to plasma membrane	Hs	biological process
mitotic spindle assembly	Hs	biological process
apical dendrite	Hs	cellular component
positive regulation of substrate adhesion-dependent cell spreading	Hs	biological process
positive regulation of neural precursor cell proliferation	Hs	biological process
positive regulation of integrin-mediated signaling pathway	Hs	biological process
positive regulation of neuron migration	Hs	biological process

GO (Blast)

52 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
G-protein coupled receptor binding	Hs	molecular function	1864
stress fiber	Hs	cellular component	1822
RNA binding	Hs	molecular function	1864
actin binding	Hs	molecular function	1922
signal transducer activity	Hs	molecular function	1864
protein binding	Hs	molecular function	1922
extracellular region	Hs	cellular component	1864
nucleus	Hs	cellular component	1864
nucleolus	Hs	cellular component	1864
cytoplasm	Hs	cellular component	1922
cytosol	Hs	cellular component	1922
cytoskeleton	Hs	cellular component	1922
actin filament	Hs	cellular component	1864
plasma membrane	Hs	cellular component	1922
brush border	Hs	cellular component	1822
cell-cell junction	Hs	cellular component	1864
focal adhesion	Hs	cellular component	1922
cell cortex	Hs	cellular component	1864
cytoskeletal protein binding	Hs	molecular function	1922
transcription factor binding	Hs	molecular function	1864
potassium channel regulator activity	Hs	molecular function	1864
actin cytoskeleton	Hs	cellular component	1864
membrane	Hs	cellular component	1922
integral component of membrane	Hs	cellular component	1822
sarcoplasm	Hs	cellular component	1922
Rho GTPase binding	Hs	molecular function	1864
Ral GTPase binding	Hs	molecular function	1864
kinase binding	Hs	molecular function	1864
Z disc	Hs	cellular component	1922
ankyrin binding	Hs	molecular function	1922
cortical cytoskeleton	Hs	cellular component	1864
small GTPase binding	Hs	molecular function	1864
Myb complex	Hs	cellular component	1864
mu-type opioid receptor binding	Hs	molecular function	1864
filamentous actin	Hs	cellular component	1864
Fc-gamma receptor I complex binding	Hs	molecular function	1864
sarcolemma	Hs	cellular component	1922
identical protein binding	Hs	molecular function	1822
protein homodimerization activity	Hs	molecular function	1864
neuronal cell body	Hs	cellular component	1864
costamere	Hs	cellular component	1922
dendritic shaft	Hs	cellular component	1864
ion channel binding	Hs	molecular function	1864
cadherin binding	Hs	molecular function	1864
phagocytic vesicle	Hs	cellular component	1822
SMAD binding	Hs	molecular function	1864
Rac GTPase binding	Hs	molecular function	1864
perinuclear region of cytoplasm	Hs	cellular component	1864
actin filament binding	Hs	molecular function	1922
GTPase binding	Hs	molecular function	1864
extracellular exosome	Hs	cellular component	1864
apical dendrite	Hs	cellular component	1864

GO (InterProScan)