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Gene Card

Best human hits

PURA; PURB; PURG

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003254

Gene Model ID

KH2012:KH.C12.676

Location

KhC12:4714108..4721861

Transcript Models and Sequences

  KH2012:KH.C12.676.v1.A.SL1-1
KH2012:KH.C12.676.v1.A.SL2-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000006338
NCBI Reference Sequence NM_001078336.1
Collections

Gateway full ORF

2 results

cien96056

Plate: VES85_H11

cima8111326

Plate: VES74_C02

Gene collection 1 (N. Satoh)

2 results

ciad009e19

Plate: R1CiGC01n04

cilv018k11

Plate: R1CiGC26j15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
PUR-bd_fam Pfam Purine-rich element binding protein family
PUR-bd_fam SMART Purine-rich element binding protein family
PUR-bd_fam PANTHER Purine-rich element binding protein family

GOSlim

34 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
RNA polymerase II regulatory region sequence-specific DNA binding Orthology molecular function
DNA binding Orthology molecular function
double-stranded DNA binding Orthology molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
nervous system development Orthology biological process
transcription factor binding Orthology molecular function
cell proliferation Orthology biological process
positive regulation of cell proliferation Orthology biological process
cell differentiation Orthology biological process
regulation of cell proliferation Orthology biological process
neuronal cell body Orthology cellular component
negative regulation of transcription, DNA-templated Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
nuclear lumen Orthology cellular component
negative regulation of gene expression Orthology biological process
nucleic acid binding Orthology molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
sequence-specific DNA binding Orthology molecular function
nucleoplasm part Orthology cellular component
macromolecular complex Orthology cellular component
organelle organization Orthology biological process
DNA replication Orthology biological process
sequence-specific double-stranded DNA binding Orthology molecular function
transcription regulatory region DNA binding Orthology molecular function
immune system process Orthology biological process
animal organ development Orthology biological process

GO (Orthology)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
nuclear chromosome, telomeric region Hs cellular component
translation repressor activity, nucleic acid binding Hs molecular function
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
DNA binding Hs molecular function
double-stranded DNA binding Hs molecular function
double-stranded telomeric DNA binding Hs molecular function
single-stranded DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function
RNA binding Hs molecular function
mRNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
DNA replication factor A complex Hs cellular component
cytoplasm Hs cellular component
DNA unwinding involved in DNA replication Hs biological process
DNA replication initiation Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
nervous system development Hs biological process
transcription factor binding Hs molecular function
cell proliferation Hs biological process
positive regulation of cell proliferation Hs biological process
negative regulation of translation Hs biological process
cell differentiation Hs biological process
dendrite Hs cellular component
purine-rich negative regulatory element binding Hs molecular function
regulation of cell proliferation Hs biological process
neuronal cell body Hs cellular component
regulation of myeloid cell differentiation Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
SMAD binding Hs molecular function

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nuclear chromosome, telomeric region Hs cellular component 236 1.08e-76
translation repressor activity, nucleic acid binding Hs molecular function 236 1.08e-76
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 224 5.24e-72
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 224 5.24e-72
DNA binding Hs molecular function 236 1.08e-76
double-stranded DNA binding Hs molecular function 236 1.08e-76
double-stranded telomeric DNA binding Hs molecular function 236 1.08e-76
single-stranded DNA binding Hs molecular function 236 1.08e-76
transcription factor activity, sequence-specific DNA binding Hs molecular function 236 1.08e-76
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 236 1.08e-76
RNA binding Hs molecular function 236 1.08e-76
mRNA binding Hs molecular function 224 5.24e-72
protein binding Hs molecular function 236 1.08e-76
nucleus Hs cellular component 236 1.08e-76
DNA replication factor A complex Hs cellular component 236 1.08e-76
cytoplasm Hs cellular component 236 1.08e-76
transcription factor binding Hs molecular function 236 1.08e-76
dendrite Hs cellular component 236 1.08e-76
purine-rich negative regulatory element binding Hs molecular function 236 1.08e-76
neuronal cell body Hs cellular component 236 1.08e-76
SMAD binding Hs molecular function 236 1.08e-76

GO (InterProScan)

No result

GO Term Analysis Type e-value

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