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Gene Card

Best human hits

STXBP1; STXBP2; STXBP3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003328

Gene Model ID

KH2012:KH.C13.115

Location

KhC13:600006..612603

Transcript Models and Sequences

  KH2012:KH.C13.115.v1.A.SL1-1

External Database Gene Card

External database links

4 results

Database Gene ID
ENSEMBL ENSCING00000002400
NCBI Reference Sequence XM_018814598.1
NCBI Reference Sequence XM_018814599.1
NCBI Reference Sequence XM_018814600.1
Collections

Gateway full ORF

2 results

cima830159

Plate: VES61_N21

cima836120

Plate: VES62_K24

Gene collection 1 (N. Satoh)

2 results

cieg057i23

Plate: R1CiGC24b02

cits037a15

Plate: R1CiGC34n13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Sec1-like Pfam Sec1-like protein
Sec1-like_sf SUPERFAMILY Sec1-like superfamily
Sec1-like PANTHER Sec1-like protein
Sec1-like PIRSF Sec1-like protein
Sec-1-like_dom2 Gene3D Sec1-like, domain 2

GOSlim

56 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
plasma membrane Orthology cellular component
protein transport Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
basolateral plasma membrane Blast cellular component
apical plasma membrane Orthology cellular component
protein kinase binding Orthology molecular function
axon Orthology cellular component
macromolecular complex Orthology cellular component
identical protein binding Orthology molecular function
myelin sheath Orthology cellular component
protein N-terminus binding Orthology molecular function
perinuclear region of cytoplasm Orthology cellular component
extracellular exosome Orthology cellular component
postsynapse Orthology cellular component
membrane organization Orthology biological process
organelle organization Orthology biological process
developmental process Orthology biological process
reproductive process Orthology biological process
chemical synaptic transmission Orthology biological process
synapse part Orthology cellular component
neuron part Orthology cellular component
axonogenesis Orthology biological process
cell communication Orthology biological process
organic substance transport Orthology biological process
cellular process Orthology biological process
ion transport Orthology biological process
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component
cytoplasmic part Orthology cellular component
membrane part Orthology cellular component
intracellular transport Orthology biological process
regulation of signaling Orthology biological process
response to lipid Orthology biological process
lysosome Orthology cellular component
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
cell projection part Orthology cellular component
enzyme binding Orthology molecular function
immune response Orthology biological process
negative regulation of apoptotic process Orthology biological process
synaptic membrane Orthology cellular component
cell adhesion Orthology biological process
blood coagulation Orthology biological process
innate immune response Orthology biological process
protein localization to membrane Orthology biological process

GO (Orthology)

65 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
SNARE binding Hs molecular function
platelet degranulation Hs biological process
developmental process involved in reproduction Hs biological process
RNA binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
plasma membrane Hs cellular component
exocytosis Hs biological process
vesicle docking involved in exocytosis Hs biological process
neurotransmitter secretion Hs biological process
neuromuscular synaptic transmission Hs biological process
axon target recognition Hs biological process
glutamate secretion Hs biological process
protein transport Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
synaptic vesicle maturation Hs biological process
vesicle-mediated transport Hs biological process
apical plasma membrane Hs cellular component
syntaxin-1 binding Hs molecular function
protein kinase binding Hs molecular function
protein domain specific binding Hs molecular function
syntaxin binding Hs molecular function
syntaxin-3 binding Hs molecular function
axon Hs cellular component
platelet alpha granule Hs cellular component
SNARE complex Hs cellular component
negative regulation of protein complex assembly Hs biological process
regulation of vesicle fusion Hs biological process
regulation of synaptic vesicle fusion to presynaptic active zone membrane Hs biological process
response to estradiol Hs biological process
macromolecular complex Hs cellular component
regulation of SNARE complex assembly Hs biological process
specific granule Hs cellular component
azurophil granule Hs cellular component
zymogen granule membrane Hs cellular component
identical protein binding Hs molecular function
terminal bouton Hs cellular component
myelin sheath Hs cellular component
phospholipase binding Hs molecular function
regulation of mast cell degranulation Hs biological process
positive regulation of mast cell degranulation Hs biological process
negative regulation of neuron apoptotic process Hs biological process
cytolytic granule Hs cellular component
phagocytic vesicle Hs cellular component
positive regulation of exocytosis Hs biological process
positive regulation of calcium ion-dependent exocytosis Hs biological process
protein N-terminus binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
presynaptic active zone membrane Hs cellular component
protein stabilization Hs biological process
long term synaptic depression Hs biological process
extracellular exosome Hs cellular component
platelet aggregation Hs biological process
tertiary granule Hs cellular component
cellular response to interferon-gamma Hs biological process
protein localization to plasma membrane Hs biological process
presynapse Hs cellular component
postsynapse Hs cellular component

GO (Blast)

40 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
SNARE binding Hs molecular function 735 0.0
RNA binding Hs molecular function 735 0.0
protein binding Hs molecular function 735 0.0
extracellular region Hs cellular component 628 0.0
nucleus Hs cellular component 735 0.0
nucleoplasm Hs cellular component 735 0.0
cytoplasm Hs cellular component 735 0.0
mitochondrion Hs cellular component 735 0.0
cytosol Hs cellular component 735 0.0
cytoskeleton Hs cellular component 735 0.0
plasma membrane Hs cellular component 735 0.0
membrane Hs cellular component 735 0.0
integral component of membrane Hs cellular component 628 0.0
basolateral plasma membrane Hs cellular component 484 8.65e-166
apical plasma membrane Hs cellular component 628 0.0
syntaxin-1 binding Hs molecular function 735 0.0
protein kinase binding Hs molecular function 735 0.0
protein domain specific binding Hs molecular function 735 0.0
syntaxin binding Hs molecular function 735 0.0
syntaxin-3 binding Hs molecular function 628 0.0
axon Hs cellular component 735 0.0
platelet alpha granule Hs cellular component 735 0.0
SNARE complex Hs cellular component 628 0.0
macromolecular complex Hs cellular component 735 0.0
specific granule Hs cellular component 628 0.0
azurophil granule Hs cellular component 628 0.0
zymogen granule membrane Hs cellular component 628 0.0
identical protein binding Hs molecular function 735 0.0
terminal bouton Hs cellular component 735 0.0
myelin sheath Hs cellular component 735 0.0
phospholipase binding Hs molecular function 735 0.0
cytolytic granule Hs cellular component 628 0.0
phagocytic vesicle Hs cellular component 735 0.0
protein N-terminus binding Hs molecular function 735 0.0
perinuclear region of cytoplasm Hs cellular component 735 0.0
presynaptic active zone membrane Hs cellular component 735 0.0
extracellular exosome Hs cellular component 735 0.0
tertiary granule Hs cellular component 628 0.0
presynapse Hs cellular component 735 0.0
postsynapse Hs cellular component 735 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
vesicle docking involved in exocytosis PANTHER biological process 1.6E-256
vesicle-mediated transport PANTHER biological process 1.6E-256

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