Gene Card
Best human hits
ELP2; NLE1; WDR33
Unique Gene ID
Cirobu.g00003373
Gene Model ID
KH2012:KH.C13.156
Location
KhC13:1773322..1776036
Transcript Models and Sequences
KH2012:KH.C13.156.v1.A.nonSL3-1
KH2012:KH.C13.156.v1.A.nonSL4-1
KH2012:KH.C13.156.v1.A.SL1-1
KH2012:KH.C13.156.v1.A.SL2-1
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000009103 |
| NCBI Reference Sequence | XM_002128614.3 |
Gateway full ORF
4 results
cien108229
Plate: VES87_B05
cien79926
Plate: VES82_H22
cien129332
Plate: VES90_I12
cien131079
Plate: VES90_J21
Gene collection 1 (N. Satoh)
1 result
cieg015k06
Plate: R1CiGC17l06
n/a
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Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Elp2 | PANTHER | Elongator complex protein 2 |
| WD40/YVTN_repeat-like_dom_sf | Gene3D | WD40/YVTN repeat-like-containing domain superfamily |
| G-protein_beta_WD-40_rep | PRINTS | G-protein beta WD-40 repeat |
| WD40_repeat_dom_sf | SUPERFAMILY | WD40-repeat-containing domain superfamily |
| WD40_repeat | ProSiteProfiles | WD40 repeat |
| WD40_repeat_dom | ProSiteProfiles | WD40-repeat-containing domain |
| WD40_repeat | Pfam | WD40 repeat |
| WD40_repeat | SMART | WD40 repeat |
| Quinoprotein_ADH-like_supfam | SUPERFAMILY | Quinoprotein alcohol dehydrogenase-like superfamily |
GOSlim
20 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA binding | Blast | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Blast | cellular component |
| nucleolus | Blast | cellular component |
| cytoplasm | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| ribosome | Blast | cellular component |
| transcription, DNA-templated | Orthology | biological process |
| regulation of transcription, DNA-templated | Orthology | biological process |
| regulation of transcription from RNA polymerase II promoter | Orthology | biological process |
| protein kinase binding | Orthology | molecular function |
| nucleoplasm part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| enzyme binding | Orthology | molecular function |
| RNA processing | Orthology | biological process |
| transcription from RNA polymerase II promoter | Orthology | biological process |
| intracellular part | Orthology | cellular component |
| cell surface receptor signaling pathway | Orthology | biological process |
| regulation of signal transduction | Orthology | biological process |
GO (Orthology)
15 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| histone acetyltransferase complex | Hs | cellular component |
| RNA polymerase II core binding | Hs | molecular function |
| tRNA wobble uridine modification | Hs | biological process |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| cytosol | Hs | cellular component |
| transcription, DNA-templated | Hs | biological process |
| regulation of transcription, DNA-templated | Hs | biological process |
| regulation of transcription from RNA polymerase II promoter | Hs | biological process |
| transcription elongation from RNA polymerase II promoter | Hs | biological process |
| transcription elongation factor complex | Hs | cellular component |
| protein kinase binding | Hs | molecular function |
| Elongator holoenzyme complex | Hs | cellular component |
| regulation of JAK-STAT cascade | Hs | biological process |
GO (Blast)
16 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| histone acetyltransferase complex | Hs | cellular component | 528 | 4.79e-176 |
| RNA polymerase II core binding | Hs | molecular function | 528 | 4.79e-176 |
| fibrillar center | Hs | cellular component | 60.1 | 5.20e-09 |
| RNA binding | Hs | molecular function | 60.1 | 5.20e-09 |
| protein binding | Hs | molecular function | 528 | 4.79e-176 |
| collagen trimer | Hs | cellular component | 60.1 | 5.20e-09 |
| nucleus | Hs | cellular component | 528 | 4.79e-176 |
| nucleoplasm | Hs | cellular component | 60.1 | 5.20e-09 |
| nucleolus | Hs | cellular component | 68.2 | 7.73e-12 |
| cytoplasm | Hs | cellular component | 528 | 4.79e-176 |
| cytosol | Hs | cellular component | 528 | 4.79e-176 |
| ribosome | Hs | cellular component | 68.2 | 7.73e-12 |
| mRNA cleavage and polyadenylation specificity factor complex | Hs | cellular component | 60.1 | 5.20e-09 |
| transcription elongation factor complex | Hs | cellular component | 528 | 4.79e-176 |
| protein kinase binding | Hs | molecular function | 528 | 4.79e-176 |
| Elongator holoenzyme complex | Hs | cellular component | 528 | 4.79e-176 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| tRNA wobble uridine modification | PANTHER | biological process | 8.8E-284 |
| protein binding | Gene3D | molecular function | 2.2E-38 |
| Elongator holoenzyme complex | PANTHER | cellular component | 8.8E-284 |
