Gene Card
Best human hits
RARS; RARS2; ZFP42
Unique Gene ID
Cirobu.g00003590
Gene Model ID
KH2012:KH.C14.177
Location
KhC14:4210069..4223233
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000007294 |
| NCBI Reference Sequence | XM_002129578.4 |
Gateway full ORF
2 results
cien108587
Plate: VES87_G06
cien69901
Plate: VES81_G07
Gene collection 1 (N. Satoh)
1 result
ciad043l12
Plate: R1CiGC04p23
n/a
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Click here to see the tree inference method
InterPro
15 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Rossmann-like_a/b/a_fold | Gene3D | Rossmann-like alpha/beta/alpha sandwich fold |
| Arg-tRNA-ligase | Hamap | Arginine-tRNA ligase |
| ArgRS_core | Pfam | Arginyl-tRNA synthetase, catalytic core domain |
| Arg-tRNA-ligase | PRINTS | Arginine-tRNA ligase |
| Arg-tRNA-synth_N_sf | Gene3D | Arginyl tRNA synthetase N-terminal domain superfamily |
| Arg-tRNA-ligase | TIGRFAM | Arginine-tRNA ligase |
| Arg-tRNA-synth_N | SMART | Arginyl tRNA synthetase N-terminal domain |
| ArgRS_core | CDD | Arginyl-tRNA synthetase, catalytic core domain |
| tRNAsynth_Ia_anticodon-bd | SUPERFAMILY | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding |
| Arg-tRNA-synth_N | Pfam | Arginyl tRNA synthetase N-terminal domain |
| DALR_anticod-bd | Pfam | DALR anticodon binding |
| Arg-tRNA-ligase | PANTHER | Arginine-tRNA ligase |
| aa-tRNA-synth_I_CS | ProSitePatterns | Aminoacyl-tRNA synthetase, class I, conserved site |
| Arg-tRNA-synth_N_sf | SUPERFAMILY | Arginyl tRNA synthetase N-terminal domain superfamily |
| DALR_anticod-bd | SMART | DALR anticodon binding |
GOSlim
24 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleotide binding | Orthology | molecular function |
| nucleic acid binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| RNA binding | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| ATP binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| mitochondrion | Orthology | cellular component |
| mitochondrial matrix | Blast | cellular component |
| cytosol | Orthology | cellular component |
| membrane | Orthology | cellular component |
| ligase activity | Orthology | molecular function |
| metal ion binding | Blast | molecular function |
| extracellular exosome | Orthology | cellular component |
| RNA metabolic process | Orthology | biological process |
| intracellular part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| cation binding | Orthology | molecular function |
| small molecule binding | Orthology | molecular function |
| anion binding | Orthology | molecular function |
| cell adhesion molecule binding | Orthology | molecular function |
GO (Orthology)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| tRNA binding | Hs | molecular function |
| nucleotide binding | Hs | molecular function |
| aminoacyl-tRNA ligase activity | Hs | molecular function |
| arginine-tRNA ligase activity | Hs | molecular function |
| protein binding | Hs | molecular function |
| ATP binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| mitochondrion | Hs | cellular component |
| cytosol | Hs | cellular component |
| translation | Hs | biological process |
| tRNA aminoacylation for protein translation | Hs | biological process |
| arginyl-tRNA aminoacylation | Hs | biological process |
| membrane | Hs | cellular component |
| ligase activity | Hs | molecular function |
| aminoacyl-tRNA synthetase multienzyme complex | Hs | cellular component |
| arginine binding | Hs | molecular function |
| cadherin binding | Hs | molecular function |
| extracellular exosome | Hs | cellular component |
GO (Blast)
23 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| tRNA binding | Hs | molecular function | 788 | 0.0 |
| nucleotide binding | Hs | molecular function | 788 | 0.0 |
| nucleic acid binding | Hs | molecular function | 39.3 | 0.005 |
| DNA binding | Hs | molecular function | 39.3 | 0.005 |
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 39.3 | 0.005 |
| RNA binding | Hs | molecular function | 228 | 2.86e-66 |
| aminoacyl-tRNA ligase activity | Hs | molecular function | 788 | 0.0 |
| arginine-tRNA ligase activity | Hs | molecular function | 788 | 0.0 |
| protein binding | Hs | molecular function | 788 | 0.0 |
| ATP binding | Hs | molecular function | 788 | 0.0 |
| nucleus | Hs | cellular component | 788 | 0.0 |
| nucleoplasm | Hs | cellular component | 788 | 0.0 |
| cytoplasm | Hs | cellular component | 788 | 0.0 |
| mitochondrion | Hs | cellular component | 788 | 0.0 |
| mitochondrial matrix | Hs | cellular component | 228 | 2.86e-66 |
| cytosol | Hs | cellular component | 788 | 0.0 |
| membrane | Hs | cellular component | 788 | 0.0 |
| ligase activity | Hs | molecular function | 788 | 0.0 |
| aminoacyl-tRNA synthetase multienzyme complex | Hs | cellular component | 788 | 0.0 |
| arginine binding | Hs | molecular function | 788 | 0.0 |
| cadherin binding | Hs | molecular function | 788 | 0.0 |
| metal ion binding | Hs | molecular function | 39.3 | 0.005 |
| extracellular exosome | Hs | cellular component | 788 | 0.0 |
GO (InterProScan)
6 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleotide binding | SUPERFAMILY | molecular function | 3.66E-31 |
| aminoacyl-tRNA ligase activity | SUPERFAMILY | molecular function | 3.66E-31 |
| ATP binding | PANTHER | molecular function | 1.4E-244 |
| cytoplasm | SMART | cellular component | 4.6E-25 |
| tRNA aminoacylation for protein translation | SUPERFAMILY | biological process | 3.66E-31 |
| arginyl-tRNA aminoacylation | PANTHER | biological process | 1.4E-244 |
