Aniseed - Gene card

Gene 'KH2012:KH.L77.1' >

Gene Card

Best human hits

MRPS11; RPS14

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003650

Gene Model ID

KH2012:KH.C14.231

Location

KhC14:1117717..1120625

Transcript Models and Sequences

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000005034
NCBI Reference Sequence	XM_002126651.1

Collections

Gateway full ORF

3 results

Gene collection 1 (N. Satoh)

4 results

ciad066n05

Plate: R1CiGC06p09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Ribosomal_S11	Hamap	Ribosomal protein S11
Ribosomal_S11	PANTHER	Ribosomal protein S11
Ribosomal_S11	PIRSF	Ribosomal protein S11
Ribosomal_S11	Pfam	Ribosomal protein S11
Ribosomal_S11_CS	ProSitePatterns	Ribosomal S11, conserved site
Ribosomal_S11_sf	Gene3D	Ribosomal protein S11 superfamily

GOSlim

15 results

GO Term	Annotation Origin	Type
RNA binding	Blast	molecular function
structural constituent of ribosome	Blast	molecular function
protein binding	Blast	molecular function
nucleoplasm	Blast	cellular component
nucleolus	Blast	cellular component
mitochondrion	Blast	cellular component
mitochondrial inner membrane	Blast	cellular component
cytosol	Blast	cellular component
ribosome	Blast	cellular component
focal adhesion	Blast	cellular component
membrane	Blast	cellular component
extracellular exosome	Blast	cellular component
mitochondrial matrix	Blast	cellular component
intracellular organelle part	Blast	cellular component
regulation of gene expression	Blast	biological process

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	257	1.38e-89
structural constituent of ribosome	Hs	molecular function	257	1.38e-89
protein binding	Hs	molecular function	257	1.38e-89
nucleoplasm	Hs	cellular component	257	1.38e-89
nucleolus	Hs	cellular component	257	1.38e-89
mitochondrion	Hs	cellular component	257	1.38e-89
mitochondrial inner membrane	Hs	cellular component	37.0	0.002
mitochondrial small ribosomal subunit	Hs	cellular component	37.0	0.002
cytosol	Hs	cellular component	257	1.38e-89
ribosome	Hs	cellular component	257	1.38e-89
focal adhesion	Hs	cellular component	257	1.38e-89
membrane	Hs	cellular component	257	1.38e-89
cytosolic small ribosomal subunit	Hs	cellular component	257	1.38e-89
intracellular ribonucleoprotein complex	Hs	cellular component	257	1.38e-89
translation regulator activity	Hs	molecular function	257	1.38e-89
mRNA 5'-UTR binding	Hs	molecular function	257	1.38e-89
extracellular exosome	Hs	cellular component	257	1.38e-89
small ribosomal subunit rRNA binding	Hs	molecular function	257	1.38e-89

GO (InterProScan)