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Gene Card

Best human hits

GAA; MGAM; MGAM2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003656

Gene Model ID

KH2012:KH.C14.237

Location

KhC14:3201667..3206449

Transcript Models and Sequences

  KH2012:KH.C14.237.v1.A.SL1-1
KH2012:KH.C14.237.v2.A.SL1-2

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000003924
Collections

Gateway full ORF

3 results

cima86332

Plate: VES57_C04

cima899618

Plate: VES72_B15

cien204085

Plate: VES101_H24

Gene collection 1 (N. Satoh)

1 result

cieg008j03

Plate: R1CiGC16f18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Glyco_hydro_b Gene3D Glycosyl hydrolase, all-beta
Glycoside_hydrolase_SF SUPERFAMILY Glycoside hydrolase superfamily
Glyco_hydro_31_N_dom Pfam Glycoside hydrolase family 31, N-terminal domain
Glyco_hydro_31_CS ProSitePatterns Glycosyl hydrolases family 31, conserved site
Gal_mutarotase_sf_dom SUPERFAMILY Galactose mutarotase-like domain superfamily
Glyco_hydro_31 Pfam Glycoside hydrolase family 31
Glyco_hydro_31_AS ProSitePatterns Glycosyl hydrolases family 31, active site

GOSlim

19 results

GO Term Annotation Origin Type
catalytic activity Blast molecular function
lysosome Blast cellular component
lysosomal membrane Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
apical plasma membrane Blast cellular component
hydrolase activity Blast molecular function
extracellular exosome Blast cellular component
binding Blast molecular function
cellular metabolic process Blast biological process
organic substance metabolic process Blast biological process
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
vacuolar part Blast cellular component
intracellular organelle lumen Blast cellular component
whole membrane Blast cellular component
intracellular organelle part Blast cellular component
bounding membrane of organelle Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
catalytic activity Hs molecular function 676 0.0
glucan 1,4-alpha-glucosidase activity Hs molecular function 565 7.58e-179
hydrolase activity, hydrolyzing O-glycosyl compounds Hs molecular function 676 0.0
alpha-1,4-glucosidase activity Hs molecular function 676 0.0
oligo-1,6-glucosidase activity Hs molecular function 676 0.0
lysosome Hs cellular component 676 0.0
lysosomal membrane Hs cellular component 676 0.0
plasma membrane Hs cellular component 676 0.0
membrane Hs cellular component 676 0.0
integral component of membrane Hs cellular component 676 0.0
amylase activity Hs molecular function 565 7.58e-179
apical plasma membrane Hs cellular component 565 7.58e-179
hydrolase activity Hs molecular function 676 0.0
hydrolase activity, acting on glycosyl bonds Hs molecular function 676 0.0
carbohydrate binding Hs molecular function 676 0.0
maltose alpha-glucosidase activity Hs molecular function 676 0.0
azurophil granule membrane Hs cellular component 676 0.0
lysosomal lumen Hs cellular component 676 0.0
extracellular exosome Hs cellular component 676 0.0
tertiary granule membrane Hs cellular component 676 0.0
alpha-glucosidase activity Hs molecular function 676 0.0
ficolin-1-rich granule membrane Hs cellular component 676 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
catalytic activity SUPERFAMILY molecular function 3.77E-24
hydrolase activity, hydrolyzing O-glycosyl compounds Pfam molecular function 2.9E-155
carbohydrate metabolic process Pfam biological process 2.9E-155
carbohydrate binding SUPERFAMILY molecular function 3.77E-24

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