Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000019659

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb4i4

Plate: R1CiGC29m11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
DNA-bd_dom_put_sf	SUPERFAMILY	Putative DNA-binding domain superfamily
Ski_DNA-bd_sf	Gene3D	Ski-like, DNA-binding domain superfamily
SKI/SNO/DAC	Pfam	SKI/SNO/DAC domain

GOSlim

25 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
cell proliferation	Orthology	biological process
macromolecular complex	Orthology	cellular component
intracellular membrane-bounded organelle	Orthology	cellular component
negative regulation of transcription, DNA-templated	Orthology	biological process
intracellular part	Orthology	cellular component
cell migration	Orthology	biological process
DNA replication	Orthology	biological process
reproductive process	Orthology	biological process
transcription initiation from RNA polymerase II promoter	Orthology	biological process
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component

GO (Orthology)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly	Hs	molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor complex	Hs	cellular component
cytoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
cell proliferation	Hs	biological process
negative regulation of cell migration	Hs	biological process
regulation of nuclear cell cycle DNA replication	Hs	biological process
intracellular membrane-bounded organelle	Hs	cellular component
negative regulation of transcription, DNA-templated	Hs	biological process
development of primary female sexual characteristics	Hs	biological process
RNA polymerase II transcriptional preinitiation complex assembly	Hs	biological process

GO (Blast)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	49.7	4.20e-06
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	235	2.95e-69
transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly	Hs	molecular function	266	1.48e-79
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	266	1.48e-79
acrosomal vesicle	Hs	cellular component	49.7	4.20e-06
DNA binding	Hs	molecular function	266	1.48e-79
chromatin binding	Hs	molecular function	49.7	4.20e-06
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	266	1.48e-79
protein binding	Hs	molecular function	266	1.48e-79
nucleus	Hs	cellular component	266	1.48e-79
nucleoplasm	Hs	cellular component	266	1.48e-79
transcription factor complex	Hs	cellular component	266	1.48e-79
cytoplasm	Hs	cellular component	266	1.48e-79
macromolecular complex	Hs	cellular component	49.7	4.20e-06
intracellular membrane-bounded organelle	Hs	cellular component	266	1.48e-79
SMAD binding	Hs	molecular function	49.7	4.20e-06

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences