Aniseed - Gene card

Gene Card

Best human hits

CCDC22

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003751

Gene Model ID

KH2012:KH.C14.324

Location

KhC14:3309385..3315927

Transcript Models and Sequences

KH2012:KH.C14.324.v1.A.ND2-1
KH2012:KH.C14.324.v1.A.SL3-1
KH2012:KH.C14.324.v1.A.SL4-1
KH2012:KH.C14.324.v2.A.SL3-1
KH2012:KH.C14.324.v2.A.SL4-1
KH2012:KH.C14.324.v2.R.ND1-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000007382
NCBI Reference Sequence	XM_002128048.4
NCBI Reference Sequence	XM_018814766.1

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

2 results

cicl061g23

Plate: R1CiGC15i08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
CCDC22	PANTHER	Coiled-coil domain-containing protein 22
CCDC22	Pfam	Coiled-coil domain-containing protein 22

GOSlim

14 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleoplasm	Orthology	cellular component
endosome	Orthology	cellular component
cytosol	Orthology	cellular component
protein transport	Orthology	biological process
protein ubiquitination	Orthology	biological process
cellular process	Orthology	biological process
cell	Orthology	cellular component
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
cellular protein modification process	Orthology	biological process
proteolysis	Orthology	biological process

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
nucleoplasm	Hs	cellular component
endosome	Hs	cellular component
cytosol	Hs	cellular component
cellular copper ion homeostasis	Hs	biological process
Golgi to plasma membrane transport	Hs	biological process
protein transport	Hs	biological process
protein ubiquitination	Hs	biological process
positive regulation of I-kappaB kinase/NF-kappaB signaling	Hs	biological process
negative regulation of I-kappaB kinase/NF-kappaB signaling	Hs	biological process
post-translational protein modification	Hs	biological process
cullin family protein binding	Hs	molecular function
positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process	Hs	biological process

GO (Blast)

5 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	354	5.07e-114
nucleoplasm	Hs	cellular component	354	5.07e-114
endosome	Hs	cellular component	354	5.07e-114
cytosol	Hs	cellular component	354	5.07e-114
cullin family protein binding	Hs	molecular function	354	5.07e-114

GO (InterProScan)