Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
NCBI Reference Sequence	NM_001032464.1
NCBI Reference Sequence	XM_009862397.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb019i01

Plate: R1CiGC31a16

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

32 results

Ci-Nut1 -1119/94 REG00000776 [ regulatory_region (extended_promoter) ]
- Ci-Nut1 -1118/38 REG00000558 [ regulatory_region (extended_promoter) ]
- Ci-Nut1 -1030/94 REG00000777 [ regulatory_region (extended_promoter) ]
  - Ci-Nut1 -927/94 REG00000778 [ regulatory_region (extended_promoter) ]
    - Ci-Nut1 -824/94 REG00000779 [ regulatory_region (extended_promoter) ]
      - Ci-Nut1 -733/94 REG00000780 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -617/94 REG00000781 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -530/94 REG00000782 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -426/94 REG00000783 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -318/94 REG00000784 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -235/94 REG00000785 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -123/94 REG00000786 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -77/94 REG00000787 [ regulatory_region (enhancer) ]
        
        Ci-Nut1 -51/94 REG00000788 [ regulatory_region (enhancer) ]
        
        Ci-Nut1 -123/94 ZicL1 mutated 1 REG00000789 [ inactive_region ]
        
        Ci-Nut1 -123/94 ZicL1 mutated 2 REG00000790 [ inactive_region ]
        
        Ci-Nut1 -123/94 ZicL1 mutated 3 REG00000791 [ inactive_region ]
        
        Ci-Nut1 -123/94 ZicL1 mutated 4 REG00000792 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -123/94 Fox mutated 1 REG00000793 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -123/94 Fox mutated 2 REG00000794 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -123/94 Fox mutated 3 REG00000795 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -123/94 Fox mutated 4 REG00000796 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -123/94 ZicL2 mutated 1 REG00000797 [ inactive_region ]
        
        Ci-Nut1 -123/94 ZicL2 mutated 2 REG00000798 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -123/94 ZicL2 mutated 3 REG00000799 [ regulatory_region (extended_promoter) ]
        
        Ci-Nut1 -123/94 ZicL2 mutated 4 REG00000800 [ regulatory_region (extended_promoter) ]
        
        REG00000804 [ regulatory_region (complex_region) ]
        
        REG00000805 [ regulatory_region (complex_region) ]
        
        REG00000806 [ regulatory_region (complex_region) ]
        
        REG00000807 [ regulatory_region (complex_region) ]
        
        REG00000808 [ regulatory_region (complex_region) ]
        
        REG00000809 [ regulatory_region (extended_promoter) ]

Ci-Nut2 -1068/+146 REG00000801 [ regulatory_region (extended_promoter) ]
- REG00000802 [ regulatory_region (extended_promoter) ]
- REG00000803 [ regulatory_region (complex_region) ]

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
GPCR_Rhodpsn	Pfam	G protein-coupled receptor, rhodopsin-like
GPCR_Rhodpsn	PRINTS	G protein-coupled receptor, rhodopsin-like
GPCR_Rhodpsn_7TM	ProSiteProfiles	GPCR, rhodopsin-like, 7TM

GOSlim

39 results

GO Term	Annotation Origin	Type
signal transducer activity	Blast	molecular function
G-protein coupled receptor activity	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
mitochondrion	Blast	cellular component
lysosome	Blast	cellular component
endosome	Blast	cellular component
early endosome	Blast	cellular component
plasma membrane	Blast	cellular component
integral component of plasma membrane	Blast	cellular component
cell surface receptor signaling pathway	Blast	biological process
G-protein coupled receptor signaling pathway	InterProScan	biological process
cell surface	Blast	cellular component
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
apical plasma membrane	Blast	cellular component
enzyme binding	Blast	molecular function
intrinsic component of membrane	Blast	cellular component
protein homodimerization activity	Blast	molecular function
macromolecular complex binding	Blast	molecular function
binding	Blast	molecular function
anion binding	Blast	molecular function
adenyl ribonucleotide binding	Blast	molecular function
molecular function regulator	Blast	molecular function
membrane raft	Blast	cellular component
plasma membrane region	Blast	cellular component
signaling receptor activity	Blast	molecular function
plasma membrane part	Blast	cellular component
basolateral plasma membrane	Blast	cellular component
intracellular organelle part	Blast	cellular component
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
metal ion transport	Blast	biological process
transmembrane transport	Blast	biological process
monovalent inorganic cation transport	Blast	biological process
cytoplasmic vesicle	Blast	cellular component
macromolecular complex	Blast	cellular component
purine nucleotide binding	Blast	molecular function
organic cyclic compound binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

37 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
amyloid-beta binding	Hs	molecular function	51.2	2.18e-07
G-protein coupled adenosine receptor activity	Hs	molecular function	53.5	2.81e-08
ADP receptor activity	Hs	molecular function	53.5	2.81e-08
signal transducer activity	Hs	molecular function	53.5	2.81e-08
G-protein coupled receptor activity	Hs	molecular function	53.5	2.81e-08
adrenergic receptor activity	Hs	molecular function	51.2	2.18e-07
beta2-adrenergic receptor activity	Hs	molecular function	51.2	2.18e-07
guanyl-nucleotide exchange factor activity	Hs	molecular function	53.5	2.81e-08
protein binding	Hs	molecular function	51.2	1.70e-07
nucleus	Hs	cellular component	51.2	2.18e-07
mitochondrion	Hs	cellular component	53.5	2.81e-08
lysosome	Hs	cellular component	51.2	2.18e-07
endosome	Hs	cellular component	51.2	2.18e-07
early endosome	Hs	cellular component	51.2	2.18e-07
plasma membrane	Hs	cellular component	53.5	2.81e-08
integral component of plasma membrane	Hs	cellular component	53.5	2.81e-08
caveola	Hs	cellular component	53.5	2.81e-08
G-protein coupled photoreceptor activity	Hs	molecular function	51.2	1.70e-07
adenylate cyclase binding	Hs	molecular function	51.2	2.18e-07
photoreceptor activity	Hs	molecular function	51.2	1.70e-07
external side of plasma membrane	Hs	cellular component	53.5	2.81e-08
basal plasma membrane	Hs	cellular component	53.5	2.81e-08
cell surface	Hs	cellular component	53.5	2.81e-08
endosome membrane	Hs	cellular component	51.2	2.18e-07
potassium channel regulator activity	Hs	molecular function	51.2	2.18e-07
membrane	Hs	cellular component	53.5	2.81e-08
integral component of membrane	Hs	cellular component	53.5	2.81e-08
apical plasma membrane	Hs	cellular component	51.2	2.18e-07
enzyme binding	Hs	molecular function	51.2	2.18e-07
clathrin-coated vesicle membrane	Hs	cellular component	51.2	2.18e-07
intrinsic component of membrane	Hs	cellular component	53.5	2.81e-08
protein homodimerization activity	Hs	molecular function	51.2	2.18e-07
receptor complex	Hs	cellular component	51.2	2.18e-07
macromolecular complex binding	Hs	molecular function	51.2	2.18e-07
G-protein coupled purinergic nucleotide receptor activity	Hs	molecular function	53.5	2.81e-08
epinephrine binding	Hs	molecular function	51.2	2.18e-07
norepinephrine binding	Hs	molecular function	51.2	2.18e-07

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
G-protein coupled receptor activity	Pfam	molecular function	1.2E-14
G-protein coupled receptor signaling pathway	Pfam	biological process	1.2E-14
integral component of membrane	Pfam	cellular component	1.2E-14

Gene Card

Best human hits

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Unique Gene ID

Gene Model ID

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Transcript Models and Sequences