Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
NCBI Reference Sequence	XM_004226862.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

3 results

citb016e10

Plate: R1CiGC30p04

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
TPR_repeat	ProSiteProfiles	Tetratricopeptide repeat
TPR_repeat	SMART	Tetratricopeptide repeat
TPR-like_helical_dom_sf	Gene3D	Tetratricopeptide-like helical domain superfamily
TPR_repeat	Pfam	Tetratricopeptide repeat
TPR-contain_dom	ProSiteProfiles	Tetratricopeptide repeat-containing domain
TPR-like_helical_dom_sf	SUPERFAMILY	Tetratricopeptide-like helical domain superfamily

GOSlim

24 results

GO Term	Annotation Origin	Type
DNA binding	Orthology	molecular function
ubiquitin-protein transferase activity	Blast	molecular function
protein binding	Orthology	molecular function
intracellular	Blast	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Blast	cellular component
mitochondrion	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
transferase activity	Blast	molecular function
nuclear membrane	Orthology	cellular component
macromolecular complex	Orthology	cellular component
nuclear part	Orthology	cellular component
regulation of transcription, DNA-templated	Orthology	biological process
nucleoplasm part	Blast	cellular component
anion binding	Blast	molecular function
binding	Blast	molecular function
organelle organization	Blast	biological process
cellular protein modification process	Blast	biological process

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
transcription factor TFIIIC complex	Hs	cellular component
transcription factor activity, core RNA polymerase III binding	Hs	molecular function
DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase III promoter	Hs	biological process
transcription from RNA polymerase III promoter	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
nuclear membrane	Hs	cellular component
5S class rRNA transcription from RNA polymerase III type 1 promoter	Hs	biological process

GO (Blast)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone acetyltransferase complex	Hs	cellular component	57.8	3.40e-08
transcription factor TFIIIC complex	Hs	cellular component	503	2.43e-163
transcription factor activity, core RNA polymerase III binding	Hs	molecular function	503	2.43e-163
DNA binding	Hs	molecular function	503	2.43e-163
ubiquitin-protein transferase activity	Hs	molecular function	42.4	0.001
protein binding	Hs	molecular function	503	2.43e-163
phosphatidylinositol-3,4,5-trisphosphate binding	Hs	molecular function	57.8	3.40e-08
intracellular	Hs	cellular component	42.4	0.001
nucleus	Hs	cellular component	503	2.43e-163
nucleoplasm	Hs	cellular component	503	2.43e-163
anaphase-promoting complex	Hs	cellular component	42.4	0.001
nucleolus	Hs	cellular component	503	2.43e-163
cytoplasm	Hs	cellular component	57.8	3.40e-08
mitochondrion	Hs	cellular component	57.8	3.40e-08
cytosol	Hs	cellular component	57.8	3.40e-08
plasma membrane	Hs	cellular component	57.8	3.40e-08
lipid binding	Hs	molecular function	57.8	3.40e-08
acetylglucosaminyltransferase activity	Hs	molecular function	57.8	3.40e-08
membrane	Hs	cellular component	503	2.43e-163
integral component of membrane	Hs	cellular component	503	2.43e-163
protein N-acetylglucosaminyltransferase activity	Hs	molecular function	57.8	3.40e-08
transferase activity	Hs	molecular function	57.8	3.40e-08
transferase activity, transferring glycosyl groups	Hs	molecular function	57.8	3.40e-08
nuclear membrane	Hs	cellular component	503	2.43e-163
macromolecular complex	Hs	cellular component	57.8	3.40e-08
histone acetyltransferase activity (H4-K5 specific)	Hs	molecular function	57.8	3.40e-08
histone acetyltransferase activity (H4-K8 specific)	Hs	molecular function	57.8	3.40e-08
histone acetyltransferase activity (H4-K16 specific)	Hs	molecular function	57.8	3.40e-08
protein O-GlcNAc transferase activity	Hs	molecular function	57.8	3.40e-08

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	1.04E-24

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences