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Gene Card

Best human hits

SYT1; SYT2; SYT5

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004124

Gene Model ID

KH2012:KH.C2.101

Location

KhC2:6805210..6812259

Transcript Models and Sequences

  KH2012:KH.C2.101.v1.A.ND4-2
KH2012:KH.C2.101.v1.A.SL1-2
KH2012:KH.C2.101.v1.A.SL2-2
KH2012:KH.C2.101.v1.A.SL3-2
KH2012:KH.C2.101.v2.A.ND4-1
KH2012:KH.C2.101.v2.A.SL1-1
KH2012:KH.C2.101.v2.A.SL2-1
KH2012:KH.C2.101.v2.A.SL3-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000006816
NCBI Reference Sequence NM_001114130.1
Collections

Gateway full ORF

2 results

cien59842

Plate: VES79_N15

cima811889

Plate: VES58_K03

Gene collection 1 (N. Satoh)

2 results

ciad002k14

Plate: R1CiGC01m05

cilv016p13

Plate: R1CiGC26m18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

1 results

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
C2_dom PRINTS C2 domain
C2_dom SMART C2 domain
C2_domain_sf Gene3D C2 domain superfamily
C2_dom ProSiteProfiles C2 domain
Synaptotagmin PRINTS Synaptotagmin
Synaptotagmin1/2 PANTHER Synaptotagmin 1/2
C2_dom Pfam C2 domain

GOSlim

50 results

GO Term Annotation Origin Type
calcium ion binding Orthology molecular function
protein binding Orthology molecular function
calmodulin binding Orthology molecular function
cytoplasm Orthology cellular component
endosome Orthology cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
chemical synaptic transmission Orthology biological process
brain development Orthology biological process
protein C-terminus binding Orthology molecular function
membrane Orthology cellular component
integral component of membrane Orthology cellular component
cell junction Orthology cellular component
cell differentiation Orthology biological process
axon Orthology cellular component
cytoplasmic vesicle Orthology cellular component
identical protein binding Orthology molecular function
neuron projection Orthology cellular component
neuronal cell body Orthology cellular component
intracellular organelle Orthology cellular component
synapse Orthology cellular component
metal ion binding Orthology molecular function
protein heterodimerization activity Orthology molecular function
perinuclear region of cytoplasm Orthology cellular component
protein homooligomerization Orthology biological process
membrane organization Orthology biological process
anion binding Orthology molecular function
organelle organization Orthology biological process
synapse part Orthology cellular component
neuron part Orthology cellular component
endomembrane system Orthology cellular component
organic substance transport Orthology biological process
cellular process Orthology biological process
ion transport Orthology biological process
cation transport Orthology biological process
intracellular transport Orthology biological process
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
intracellular organelle part Orthology cellular component
cytoplasmic part Orthology cellular component
membrane part Orthology cellular component
macromolecular complex Orthology cellular component
synaptic membrane Orthology cellular component
cell projection part Orthology cellular component
small molecule binding Orthology molecular function
receptor binding Orthology molecular function
protein oligomerization Orthology biological process
regulation of signaling Orthology biological process
neuron projection morphogenesis Orthology biological process

GO (Orthology)

78 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
SNARE binding Hs molecular function
phosphatidylserine binding Hs molecular function
calcium ion binding Hs molecular function
detection of calcium ion Hs biological process
protein binding Hs molecular function
calmodulin binding Hs molecular function
phospholipid binding Hs molecular function
calcium-dependent phospholipid binding Hs molecular function
1-phosphatidylinositol binding Hs molecular function
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function
cytoplasm Hs cellular component
endosome Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
vesicle fusion Hs biological process
chemical synaptic transmission Hs biological process
neurotransmitter secretion Hs biological process
brain development Hs biological process
synaptic vesicle Hs cellular component
protein C-terminus binding Hs molecular function
glutamate secretion Hs biological process
regulation of dopamine secretion Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
synaptic vesicle exocytosis Hs biological process
syntaxin-1 binding Hs molecular function
regulation of exocytosis Hs biological process
regulation of calcium ion-dependent exocytosis Hs biological process
syntaxin binding Hs molecular function
cell junction Hs cellular component
secretory granule Hs cellular component
cell differentiation Hs biological process
clathrin binding Hs molecular function
integral component of synaptic vesicle membrane Hs cellular component
syntaxin-3 binding Hs molecular function
axon Hs cellular component
transport vesicle membrane Hs cellular component
clathrin-coated vesicle membrane Hs cellular component
synaptic vesicle membrane Hs cellular component
dense core granule Hs cellular component
SNARE complex Hs cellular component
positive regulation of vesicle fusion Hs biological process
cytoplasmic vesicle Hs cellular component
chromaffin granule membrane Hs cellular component
presynaptic membrane Hs cellular component
identical protein binding Hs molecular function
neuron projection Hs cellular component
neuronal cell body Hs cellular component
terminal bouton Hs cellular component
intracellular organelle Hs cellular component
inositol 1,3,4,5 tetrakisphosphate binding Hs molecular function
neuron projection terminus Hs cellular component
synapse Hs cellular component
positive regulation of calcium ion-dependent exocytosis Hs biological process
metal ion binding Hs molecular function
protein heterodimerization activity Hs molecular function
vesicle docking Hs biological process
calcium-dependent protein binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
synaptic vesicle endocytosis Hs biological process
calcium ion-regulated exocytosis of neurotransmitter Hs biological process
low-density lipoprotein particle receptor binding Hs molecular function
positive regulation of synaptic transmission Hs biological process
protein homooligomerization Hs biological process
protein heterooligomerization Hs biological process
response to calcium ion Hs biological process
regulation of synaptic transmission, glutamatergic Hs biological process
recycling endosome membrane Hs cellular component
excitatory synapse Hs cellular component
clathrin-sculpted acetylcholine transport vesicle membrane Hs cellular component
clathrin-sculpted glutamate transport vesicle membrane Hs cellular component
membrane organization Hs biological process
clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane Hs cellular component
clathrin-sculpted monoamine transport vesicle membrane Hs cellular component
cellular response to calcium ion Hs biological process
positive regulation of dendrite extension Hs biological process
proximal neuron projection Hs cellular component

GO (Blast)

54 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
SNARE binding Hs molecular function 477 4.35e-168
phosphatidylserine binding Hs molecular function 477 4.35e-168
calcium ion binding Hs molecular function 477 4.35e-168
protein binding Hs molecular function 477 4.35e-168
calmodulin binding Hs molecular function 477 4.35e-168
phospholipid binding Hs molecular function 477 4.35e-168
calcium-dependent phospholipid binding Hs molecular function 477 4.35e-168
1-phosphatidylinositol binding Hs molecular function 477 4.35e-168
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function 477 4.35e-168
cytoplasm Hs cellular component 477 4.35e-168
endosome Hs cellular component 409 1.14e-141
Golgi apparatus Hs cellular component 477 4.35e-168
cytosol Hs cellular component 477 4.35e-168
plasma membrane Hs cellular component 477 4.35e-168
synaptic vesicle Hs cellular component 477 4.35e-168
protein C-terminus binding Hs molecular function 477 4.35e-168
membrane Hs cellular component 477 4.35e-168
integral component of membrane Hs cellular component 477 4.35e-168
syntaxin-1 binding Hs molecular function 477 4.35e-168
syntaxin binding Hs molecular function 477 4.35e-168
cell junction Hs cellular component 477 4.35e-168
secretory granule Hs cellular component 477 4.35e-168
clathrin binding Hs molecular function 477 4.35e-168
integral component of synaptic vesicle membrane Hs cellular component 477 4.35e-168
syntaxin-3 binding Hs molecular function 477 4.35e-168
axon Hs cellular component 477 4.35e-168
transport vesicle membrane Hs cellular component 477 4.35e-168
clathrin-coated vesicle membrane Hs cellular component 477 4.35e-168
synaptic vesicle membrane Hs cellular component 477 4.35e-168
dense core granule Hs cellular component 477 4.35e-168
SNARE complex Hs cellular component 477 4.35e-168
cytoplasmic vesicle Hs cellular component 477 4.35e-168
chromaffin granule membrane Hs cellular component 477 4.35e-168
presynaptic membrane Hs cellular component 477 4.35e-168
identical protein binding Hs molecular function 477 4.35e-168
neuron projection Hs cellular component 477 4.35e-168
neuronal cell body Hs cellular component 409 1.14e-141
terminal bouton Hs cellular component 477 4.35e-168
intracellular organelle Hs cellular component 477 4.35e-168
inositol 1,3,4,5 tetrakisphosphate binding Hs molecular function 462 1.94e-162
neuron projection terminus Hs cellular component 477 4.35e-168
synapse Hs cellular component 477 4.35e-168
metal ion binding Hs molecular function 477 4.35e-168
protein heterodimerization activity Hs molecular function 477 4.35e-168
calcium-dependent protein binding Hs molecular function 477 4.35e-168
perinuclear region of cytoplasm Hs cellular component 409 1.14e-141
low-density lipoprotein particle receptor binding Hs molecular function 477 4.35e-168
recycling endosome membrane Hs cellular component 409 1.14e-141
excitatory synapse Hs cellular component 477 4.35e-168
clathrin-sculpted acetylcholine transport vesicle membrane Hs cellular component 477 4.35e-168
clathrin-sculpted glutamate transport vesicle membrane Hs cellular component 477 4.35e-168
clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane Hs cellular component 477 4.35e-168
clathrin-sculpted monoamine transport vesicle membrane Hs cellular component 477 4.35e-168
proximal neuron projection Hs cellular component 409 1.14e-141

GO (InterProScan)

4 results

GO Term Analysis Type e-value
calcium-dependent phospholipid binding PANTHER molecular function 1.4E-185
neurotransmitter secretion PANTHER biological process 1.4E-185
synaptic vesicle PANTHER cellular component 1.4E-185
membrane PRINTS cellular component 8.6E-20

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