Gene Card
Best human hits
CXXC1; DIDO1; PHF2
Unique Gene ID
Cirobu.g00004232
Gene Model ID
KH2012:KH.C2.1107
Location
KhC2:6699416..6701368
Transcript Models and Sequences
KH2012:KH.C2.1107.v1.A.nonSL1-1
KH2012:KH.C2.1107.v1.A.nonSL2-1
KH2012:KH.C2.1107.v1.A.nonSL3-1
KH2012:KH.C2.1107.v1.A.nonSL4-1
KH2012:KH.C2.1107.v1.A.nonSL5-1
KH2012:KH.C2.1107.v1.A.nonSL6-1
KH2012:KH.C2.1107.v1.A.nonSL7-1
KH2012:KH.C2.1107.v1.A.nonSL8-1
KH2012:KH.C2.1107.v1.A.nonSL9-1
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000007220 |
| NCBI Reference Sequence | NM_001078437.1 |
Gateway full ORF
2 results
cien79118
Plate: VES82_N18
cien202924
Plate: VES101_H20
Gene collection 1 (N. Satoh)
4 results
cieg003l20
Plate: R1CiGC15l22
ciad057k05
Plate: R1CiGC05n08
cits041l07
Plate: R1CiGC35e16
citb075e09
Plate: R1CiGC46g14
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
8 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_PHD-finger | Pfam | Zinc finger, PHD-finger |
| CpG-bd_C | Pfam | CpG binding protein, C-terminal |
| Znf_CXXC | ProSiteProfiles | Zinc finger, CXXC-type |
| Znf_FYVE_PHD | SUPERFAMILY | Zinc finger, FYVE/PHD-type |
| Zinc_finger_PHD-type_CS | ProSitePatterns | Zinc finger, PHD-type, conserved site |
| Znf_PHD-finger | ProSiteProfiles | Zinc finger, PHD-finger |
| Znf_PHD | SMART | Zinc finger, PHD-type |
| Znf_CXXC | Pfam | Zinc finger, CXXC-type |
GOSlim
31 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| core promoter proximal region sequence-specific DNA binding | Orthology | molecular function |
| DNA binding | Orthology | molecular function |
| transcription coactivator activity | Blast | molecular function |
| RNA binding | Blast | molecular function |
| iron ion binding | Blast | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| nucleolus | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| cytosol | Orthology | cellular component |
| cytoskeleton | Blast | cellular component |
| transcription, DNA-templated | Orthology | biological process |
| regulation of transcription, DNA-templated | Orthology | biological process |
| zinc ion binding | Orthology | molecular function |
| nuclear speck | Orthology | cellular component |
| positive regulation of transcription, DNA-templated | Orthology | biological process |
| metal ion binding | Orthology | molecular function |
| oxidation-reduction process | Blast | biological process |
| nuclear lumen | Orthology | cellular component |
| nucleoplasm part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| organelle organization | Orthology | biological process |
| transferase activity | Orthology | molecular function |
| cellular protein modification process | Orthology | biological process |
| sequence-specific DNA binding | Orthology | molecular function |
| intracellular organelle part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| cytoskeletal part | Blast | cellular component |
| microtubule cytoskeleton | Blast | cellular component |
| catalytic activity | Blast | molecular function |
GO (Orthology)
18 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| core promoter proximal region sequence-specific DNA binding | Hs | molecular function |
| DNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| cytosol | Hs | cellular component |
| transcription, DNA-templated | Hs | biological process |
| regulation of transcription, DNA-templated | Hs | biological process |
| zinc ion binding | Hs | molecular function |
| nuclear matrix | Hs | cellular component |
| nuclear speck | Hs | cellular component |
| histone methyltransferase complex | Hs | cellular component |
| histone methyltransferase activity (H3-K4 specific) | Hs | molecular function |
| unmethylated CpG binding | Hs | molecular function |
| positive regulation of transcription, DNA-templated | Hs | biological process |
| metal ion binding | Hs | molecular function |
| Set1C/COMPASS complex | Hs | cellular component |
| histone H3-K4 methylation | Hs | biological process |
GO (Blast)
30 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| chromosome, centromeric region | Hs | cellular component | 63.9 | 1.95e-10 |
| kinetochore | Hs | cellular component | 63.9 | 1.95e-10 |
| condensed chromosome kinetochore | Hs | cellular component | 63.9 | 1.95e-10 |
| core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 340 | 7.22e-109 |
| DNA binding | Hs | molecular function | 340 | 7.22e-109 |
| transcription coactivator activity | Hs | molecular function | 63.9 | 1.95e-10 |
| RNA binding | Hs | molecular function | 66.6 | 3.27e-11 |
| iron ion binding | Hs | molecular function | 63.9 | 1.95e-10 |
| protein binding | Hs | molecular function | 340 | 7.22e-109 |
| nucleus | Hs | cellular component | 340 | 7.22e-109 |
| nucleoplasm | Hs | cellular component | 340 | 7.22e-109 |
| chromosome | Hs | cellular component | 63.9 | 1.95e-10 |
| nucleolus | Hs | cellular component | 63.9 | 1.95e-10 |
| cytoplasm | Hs | cellular component | 66.6 | 3.27e-11 |
| spindle | Hs | cellular component | 66.6 | 3.27e-11 |
| cytosol | Hs | cellular component | 340 | 7.22e-109 |
| cytoskeleton | Hs | cellular component | 66.6 | 3.27e-11 |
| zinc ion binding | Hs | molecular function | 340 | 7.22e-109 |
| nuclear matrix | Hs | cellular component | 340 | 7.22e-109 |
| oxidoreductase activity | Hs | molecular function | 63.9 | 1.95e-10 |
| nuclear speck | Hs | cellular component | 340 | 7.22e-109 |
| histone demethylase activity | Hs | molecular function | 63.9 | 1.95e-10 |
| histone demethylase activity (H3-K9 specific) | Hs | molecular function | 63.9 | 1.95e-10 |
| methylated histone binding | Hs | molecular function | 63.9 | 1.95e-10 |
| histone methyltransferase complex | Hs | cellular component | 340 | 7.22e-109 |
| histone methyltransferase activity (H3-K4 specific) | Hs | molecular function | 340 | 7.22e-109 |
| unmethylated CpG binding | Hs | molecular function | 340 | 7.22e-109 |
| metal ion binding | Hs | molecular function | 340 | 7.22e-109 |
| Set1C/COMPASS complex | Hs | cellular component | 340 | 7.22e-109 |
| dioxygenase activity | Hs | molecular function | 63.9 | 1.95e-10 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| DNA binding | Pfam | molecular function | 1.1E-9 |
| zinc ion binding | Pfam | molecular function | 1.1E-9 |
