Aniseed - Gene card

Gene Card

Best human hits

PPP6R1; PPP6R2; PPP6R3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004305

Gene Model ID

KH2012:KH.C2.135

Location

KhC2:6914461..6927705

Transcript Models and Sequences

KH2012:KH.C2.135.v1.A.ND1-1
KH2012:KH.C2.135.v2.A.SL2-1
KH2012:KH.C2.135.v2.A.SL3-1
KH2012:KH.C2.135.v3.A.SL2-2
KH2012:KH.C2.135.v3.A.SL3-2

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000006802
NCBI Reference Sequence	XM_002131652.4
NCBI Reference Sequence	XM_009859421.2
NCBI Reference Sequence	XM_018817370.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

4 results

cieg091l04

Plate: R1CiGC40p19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
SAPS	PANTHER	SIT4 phosphatase-associated protein family
ARM-type_fold	SUPERFAMILY	Armadillo-type fold
SAPS	Pfam	SIT4 phosphatase-associated protein family

GOSlim

16 results

GO Term	Annotation Origin	Type
Golgi membrane	Orthology	cellular component
binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
intracellular membrane-bounded organelle	Orthology	cellular component
protein metabolic process	Orthology	biological process
enzyme binding	Orthology	molecular function
protein dephosphorylation	Orthology	biological process
regulation of cellular metabolic process	Orthology	biological process
organelle organization	Orthology	biological process
intracellular transport	Orthology	biological process
membrane organization	Orthology	biological process

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
Golgi membrane	Hs	cellular component
binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
glycoprotein catabolic process	Hs	biological process
Rho GTPase binding	Hs	molecular function
protein phosphatase binding	Hs	molecular function
intracellular membrane-bounded organelle	Hs	cellular component
regulation of phosphoprotein phosphatase activity	Hs	biological process
COPII vesicle coating	Hs	biological process

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
Golgi membrane	Hs	cellular component	601
binding	Hs	molecular function	601
protein binding	Hs	molecular function	601
nucleus	Hs	cellular component	601
nucleoplasm	Hs	cellular component	601
cytoplasm	Hs	cellular component	601
cytosol	Hs	cellular component	601
plasma membrane	Hs	cellular component	601
Rho GTPase binding	Hs	molecular function	550
protein phosphatase binding	Hs	molecular function	601
intracellular membrane-bounded organelle	Hs	cellular component	594

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
binding	SUPERFAMILY	molecular function	3.02E-6